LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi18g0232	ATGAAAGATATTGGTCCCAATTTAAACTTCATTAAGACTCCGGCATTCATCAAAATTACTGCCTTTGCCATTATCGTTCTCTCTTGCTTCTACCTCGGCAAGCACTATTCCGACGGCTACCGACAGCTCTCGTTCTTCTCAACTTTCCATTCGCCGCAAACTGATTCCATCATCGATGTCGCCGTCGGTGTTTCTCCCAATGTCGGCAAGTTCTCCGACCAGAACTTGAACCTGACCGCTCCCCCTTCGATTCCCGGTTCGCCGCCCAAGAACTCGAAGAATGCTCCGCCGCCGGCTGTGGAGAGGATAGGAATTGTTGATGAGGACGGGGCGATGTCGGTGGAGTTCGAGGTCGGCGAGTTAGATCCGCATTCGGTGGAGGATTTGGGGAATTTGGATGGAGAAGAGGAAAAAAAGGTTGGAAATAGGGATTCTACGGTTAAGATTGAGAATTTTAGGGTGTGTGAAGCGAGTATGCAAGATTACATACCTTGTTTGGACAATGTGAAGGAGATCGCAAGATTGAATTCGACGGAAAAGGGGGAGAAATACGAGCGGCATTGTCCGGGGAAAGGGGAAGGATTGGATTGTTTGGTTCCGATGCCCCAAGGTTACAAGCCTCGGATTCCTTGGCCGGCAAGTAGAGATGAGGTGTGGTTCAGCAATGTACCCCATACACGACTGGTTGAAGATAAAGGGGGCCAGAATTGGATATCAATAAAAGGTGATAAATTTGTATTTCCAGGAGGTGGAACACAATTTATTCATGGAGCAGATCAATACTTGGATCAGATTTCACAGATGGTTCCTGACATTGCATTTGGTAACCACACCCGAGTTGTCTTGGACATTGGTTGTGGAGTGGCCAGTTTTGGTGCCTTTTTGCTGCAACGTAATGTGATCACTCTATCAATAGCTCCAAAAGATGTTCATGAGAACCAGATTCAATTTGCGCTAGAGCGTGGTGTGCCGGCCATGGTAGCAGTATTTGCGACACACCGGTTGTTATATCCAAGCCAGGCTTTTGACTTGATACATTGCTCAAGATGTAGAATTAATTGGACCCGTGATGATGGAATTCTGCTTCTTGAGGTCAACAGGATGCTAAGGGCAGGAGGATACTTTGCTTGGGCTGCACAGCCTGTTTATAAACATGAAGGGAACCTCCAAGAACAGTGGAAAGAAATGGAGGACCTCACAATTCGCCTTTGTTGGGAACTTGTAAAGAAGGAGGGATATATTGCCATATGGAGAAAGCCTTTAAACAACAGTTGTTATCTTAATCGAGATACCGGAGTGCAACCTCCATTATGTGATCCTAATGATGATCCAGATGATGTTTGGTACGTTGGAATGAAGCCATGCATCACTCTATTACCTGAGAATGGCTATGGGGCTAATGTAACTGCATGGCCTGCACGCCTTAATGATCTACCAGAGAGGCTCCAAACCATAGAAATGGATGCCTACATATCCAGAAAGGAAATCCTCAAGGCAGACACAAAATTTTGGCATGAAGTAATATATGGTTATGTTCATGCTTACCACTGGAATGATTCAAAATTGAGAAATGTGATGGACATGAGAGCAGGATTTGGAGGGTTTGCAGCAGCACTAATTGATTTCCAAGTTGATTGCTGGGTTATGAATGTTGTTCCAGTTAGTGGATTCAACACCCTGCCTGTAATCTATGATCGTGGACTCATAGGAGTTAGGCATGACTGGTGTGAGCCATTTGACACCTACCCAAGAACATATGACCTATTGCATGCAGCGGGTCTCTTCTCCATAGAGCAAAAAAGATGTAATATCTCAAACATCATGCTTGAGATAGATCGAATGCTAAGACCTGGTGGGCGTGTTTATATCCGTGATACAGTATCTGTTGTGAATGAACTACATGCAATTGCGGTTGCCATGGGATGGGCGTCTGCTGTACATGACACAAGTGAAGGTCCCCATGCAAGTTGGAGACTTTTGAGGTGTGACAAGCGATTTTGA	2001	0.4538	MKDIGPNLNFIKTPAFIKITAFAIIVLSCFYLGKHYSDGYRQLSFFSTFHSPQTDSIIDVAVGVSPNVGKFSDQNLNLTAPPSIPGSPPKNSKNAPPPAVERIGIVDEDGAMSVEFEVGELDPHSVEDLGNLDGEEEKKVGNRDSTVKIENFRVCEASMQDYIPCLDNVKEIARLNSTEKGEKYERHCPGKGEGLDCLVPMPQGYKPRIPWPASRDEVWFSNVPHTRLVEDKGGQNWISIKGDKFVFPGGGTQFIHGADQYLDQISQMVPDIAFGNHTRVVLDIGCGVASFGAFLLQRNVITLSIAPKDVHENQIQFALERGVPAMVAVFATHRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEGNLQEQWKEMEDLTIRLCWELVKKEGYIAIWRKPLNNSCYLNRDTGVQPPLCDPNDDPDDVWYVGMKPCITLLPENGYGANVTAWPARLNDLPERLQTIEMDAYISRKEILKADTKFWHEVIYGYVHAYHWNDSKLRNVMDMRAGFGGFAAALIDFQVDCWVMNVVPVSGFNTLPVIYDRGLIGVRHDWCEPFDTYPRTYDLLHAAGLFSIEQKRCNISNIMLEIDRMLRPGGRVYIRDTVSVVNELHAIAVAMGWASAVHDTSEGPHASWRLLRCDKRF*	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi18g0232	666	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	495	627	IPR029063	-
	Vvi18g0232	666	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	136	663	IPR004159	GO:0008168
	Vvi18g0232	666	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	185	407	IPR029063	-
	Vvi18g0232	666	MobiDBLite	consensus disorder prediction	75	99	-	-
	Vvi18g0232	666	FunFam	probable methyltransferase PMT3	257	420	-	-
	Vvi18g0232	666	Gene3D	Vaccinia Virus protein VP39	259	418	IPR029063	-
	Vvi18g0232	666	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	29	-	-
	Vvi18g0232	666	CDD	AdoMet_MTases	281	375	-	-
	Vvi18g0232	666	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	161	664	IPR004159	GO:0008168

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi18g0232	Vvi-Chr18	2177659	2196973	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi18g0232	-		-	vvi:100248795	1373.61