Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0210 ATGAAGGCACTTTCTTTTGACAAATCTGAGGAAGAGAGAAGTCTAGCTATGTATTTTCTTTCTTCTTTGAAAGAAAATCGTTTATTTCAACTTCTTGAGGACAATATATCGCACGAGGTAAATGGTGAAGAACTCAATGAAGTTGCTTTGCTTGCAAAGAGATGTTTGGAATTAAAAGGTGAAGATAGACCTACTATGAAGGAAGTAGCAATGGAACTTGAAGGTATGAGAAAAATGAAAATGCATCCATGGATTGGTGAATTGAATTCAGAAGAGACGATTCACTTACTTGATGAATCCTCGAATACTCATCAATATGATACTAATGGTAATGTCACGACTGTGTATGATAGCATTAGGGATCATATAACATTACCATTACATAATGCTAGATAA 396 0.3434 MKALSFDKSEEERSLAMYFLSSLKENRLFQLLEDNISHEVNGEELNEVALLAKRCLELKGEDRPTMKEVAMELEGMRKMKMHPWIGELNSEETIHLLDESSNTHQYDTNGNVTTVYDSIRDHITLPLHNAR* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0210 131 Gene3D Transferase(Phosphotransferase) domain 1 2 107 - -
Vvi18g0210 131 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 89 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0210 Vvi-Chr18 1877361 1877756 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0210 2 131 Receptor kinase-like Gene Family AT1G21230 37.405 4.23e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0210 - - vvi:100259095 264.618