Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0208 ATGGATTTCGGATCTTTTTACATACCGGATAAGAGTAAATCAAGTACGAGGGGAGATGATGCTTATTTTATTAGTAAACATCATCAAACCATTGGTTTAGCCGATGGCGTGGCTGGTTGGGCAAAGCAAGGCATAGATGGGGGTGAATATGCTCGACAACTAATGGATAATTGTGTCACCACCCTTTATGCGGAAGATAAAGAAATTGTGTATCCACAAATGGTTTTGGAAGAAGCTTACTCTAATACTAATGTTGAAGGATCATCCACAGCATGTATCATAACACTTACGGATGAGGAGCTTATGATTGGGGTAAGGGCAGGAGATGTGGTTGTGGTTGGAACGGATGGACTGTTCGACAATGTGTTCGTAGATGAGATGGAGGTGGTTATAAGGGTTCTGCGTGAAGAAGGTTGTATGGAGCCACAACTATTGGCCAAGGTATTGGCGGAGCTGGCCGAGGAAAATTCACTGATTAAAAGTGGTGATTCCCCGTACACAATAGCTGCATTGATGGAAGGAAAGTTTAGAAGTGGTGGCAAACCCGACGACATCACTGTGATAGTTGCACGCATTGTACCACCCATGGACATACTCTGA 600 0.4383 MDFGSFYIPDKSKSSTRGDDAYFISKHHQTIGLADGVAGWAKQGIDGGEYARQLMDNCVTTLYAEDKEIVYPQMVLEEAYSNTNVEGSSTACIITLTDEELMIGVRAGDVVVVGTDGLFDNVFVDEMEVVIRVLREEGCMEPQLLAKVLAELAEENSLIKSGDSPYTIAALMEGKFRSGGKPDDITVIVARIVPPMDIL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0208 199 Gene3D - 91 194 IPR036457 -
Vvi18g0208 199 PANTHER PROTEIN PHOSPHATASE 2C 100 192 IPR039123 -
Vvi18g0208 199 SUPERFAMILY PP2C-like 2 192 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0208 Vvi-Chr18 1841606 1842659 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0208 K17508 - vvi:100255763 369.777