Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0204 ATGAAAATATTGAGTGAAAGGAGTTTGATCATGGATCTCGGATCTTTTTACATACCGGATAAGAATAAATCAAGTACAAAGGGAGATGATGCTTATTTTATTAGTAAACATCATCAAACCATTGGTTTAGCAGATGGCGTAGCTGGTTGGGCAGAGCAGGGCATAGATGGGGGTGAATATGCTCGACAACTAATGGATAATTGTGTCACCACCCTTTATGCGGAAGAAAAAGAAATTGTGTATCCACAAATAGTTTTGGAAAAAGCTTACTCTAATACTAATGTTGAAGGATCATCCACAGCATGTATCATAACACTTATGAAGGAGTATTTAAATGTTGTCAATGTTGGAGACAGTGGATTCATGTTATTTAGAAATGGAAATATGATATATAAGTCATCCATACAACAATATTTTTTTAATTGTCCGTATCAATTGGGGAAGAGCAGCGGATGTGATGATCCAAGTATAGCAAAGGAGCTTATAATTGGGGTAAGGGCAGGAGATGTGGTTGTGGTTGGAACGGATGGACTGTTCGACAATGTGTTCGTAAGTGAGATGGAGGTGGCTATAAGGGTTCTGCGTGACGAAGGTTGTCTGAAGCCACAACTATTGGCCAAGTTATTGGCGGAACAGGCCTTGGAAAATTCACTGATTAAAAGTGGTGATTCCCCGTACACAATAGCTGCATCGAAGGAAGGAAAGTTTAGAAGTGGTGGCAAACCCGACGACATCACTGTGATAGTTGCACGCATTGTACCACCCATGGACATACTATGA 780 0.4013 MKILSERSLIMDLGSFYIPDKNKSSTKGDDAYFISKHHQTIGLADGVAGWAEQGIDGGEYARQLMDNCVTTLYAEEKEIVYPQIVLEKAYSNTNVEGSSTACIITLMKEYLNVVNVGDSGFMLFRNGNMIYKSSIQQYFFNCPYQLGKSSGCDDPSIAKELIIGVRAGDVVVVGTDGLFDNVFVSEMEVAIRVLRDEGCLKPQLLAKLLAEQALENSLIKSGDSPYTIAASKEGKFRSGGKPDDITVIVARIVPPMDIL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0204 259 ProSiteProfiles PPM-type phosphatase domain profile. 15 252 IPR001932 -
Vvi18g0204 259 SMART PP2C_SIG_2 13 252 IPR001932 -
Vvi18g0204 259 SMART PP2C_4 2 250 IPR001932 -
Vvi18g0204 259 PANTHER PROTEIN PHOSPHATASE 2C 6 252 IPR039123 -
Vvi18g0204 259 Gene3D - 5 253 IPR036457 -
Vvi18g0204 259 SUPERFAMILY PP2C-like 13 252 IPR036457 -
Vvi18g0204 259 Pfam Stage II sporulation protein E (SpoIIE) 78 252 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0204 Vvi-Chr18 1819434 1820567 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0204 K17508 - vvi:100257487 484.567