Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0195 ATGGAAATGAATGAAGATATTATCATTGTGGGTGCTGGAATAGGGGGCCTGACCACATGTTTAGGACTTCACAGGTTGGGGTTGCGGAGCTTGGTTTTGGAATCATCAGACAGCTTGAGAGTTACAGGATTTGCACTCACAACATGGAAGAATGCTTGGAGGGCATTGGATGCTGTAGGCGTCGGTGATTCCATCAGACAACAGCATATGCAAATTCAGGGGCTCCAGGTTTTTTCTACAATTTCTGGACAGCCTACTTCAGAGATCTCATTCGGAGGCAAATGGGGAATCCATGAAATTCGCTGTGTAAGAAGGAAGGTGCTACTTGAAACCCTCGAGAGGGAGTTGCCTCGTGGCAGTATCAGGTATTCCTCCAAGGTGGTTTCCATCCAGGAATCAGGACACTACAAAACCGTGCACCTTGCAGATGGCTCCGTCCTGAAAACTAAGGTGTTAATCGGCTGCGATGGAGTTAATTCACTTGTAGCGAATTGGCTGGGTCTTGACAAACCGGTTGATTCCGGGCGTTCAGCCGTTAGAGGCCTTGTGGAGTTCCCAGATGGTCATGGATTGGAGCCCAAATTCCGTCAACACTTTGGAAATGGCGTTCGCCATGGGGTTATACCGTGTGGCCCCACTACCTTGTATTGGTTTCTCACTTTTGCTCCATCTGTCCACGGCGTAGACACTGAGGAAATGGATCAGAACCCAGCTAAGATGAAGGATTTTGTATTAAGTAAGCTTGGGAAAGTGCCCCAACATATAGAAAATGTGTTTGAGAAAACTGCATTGGACTGTATGTCCTGCTCTCCATTAAAGTTTAGGCTACCATGGAAAGTAGCAACAGGCCATATCTACAAGGGCAATGTTTGTGTAGCAGGCGACGCGCTTCATCCGATGACACCTGATATCGGACAAGGGGGATGCTCTGCGATGGAAGATGGCGTTGTTCTGGCGAGGTGCCTTGGAGAAGTCTTACTGAGAAAACCCACCAGGGAAGATGGAGAAGGAAAAGATGAGGAATGTTACAAGAGGATCAGCGAGGGATTGGAGAAGTATGCAAAAGAGAGGAGATGGAGAAGTTTCAAGCTGATCACTACTGCATATGTGGTGGGTCTCATACAGGAGAGTGACTGGAAAGTGGTGAGATTCTTGAGAGAAAAGTTTCTGTCGGGATTCTTGGCTAACCTCTTCTTGAGGATGGGTGATTTTGATTGCGGGCAACTCAGCATTTCTTAA 1239 0.4738 MEMNEDIIIVGAGIGGLTTCLGLHRLGLRSLVLESSDSLRVTGFALTTWKNAWRALDAVGVGDSIRQQHMQIQGLQVFSTISGQPTSEISFGGKWGIHEIRCVRRKVLLETLERELPRGSIRYSSKVVSIQESGHYKTVHLADGSVLKTKVLIGCDGVNSLVANWLGLDKPVDSGRSAVRGLVEFPDGHGLEPKFRQHFGNGVRHGVIPCGPTTLYWFLTFAPSVHGVDTEEMDQNPAKMKDFVLSKLGKVPQHIENVFEKTALDCMSCSPLKFRLPWKVATGHIYKGNVCVAGDALHPMTPDIGQGGCSAMEDGVVLARCLGEVLLRKPTREDGEGKDEECYKRISEGLEKYAKERRWRSFKLITTAYVVGLIQESDWKVVRFLREKFLSGFLANLFLRMGDFDCGQLSIS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0195 412 Gene3D - 6 386 IPR036188 -
Vvi18g0195 412 SUPERFAMILY FAD/NAD(P)-binding domain 6 395 IPR036188 -
Vvi18g0195 412 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 4 410 IPR044560 -
Vvi18g0195 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 - -
Vvi18g0195 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 - -
Vvi18g0195 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Vvi18g0195 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 - -
Vvi18g0195 412 Pfam FAD binding domain 6 326 IPR002938 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0195 Vvi-Chr18 1762014 1765281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0195 2 410 Miscellaneous Gene Families AT5G05320 53.171 7.84e-151 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0195 - - vvi:100259199 842.802