Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0193 ATGGATCGGTACCAGAGGGTGGAGAAGCCGAGAGAGGAGACGCCAATAGACGAGAATGAGATACGGATTACAAGCCAGGGAAGGATGCGCAGCTATATCACATATGCTATGAGTCTACTTCAGGAAAAAGGGTCAAATGAAATTGTGTTTAAGGCGATGGGTAGAGCAATCAACAAGACAGTAACAATTGTGGAGTTAATCAAGAGAAGGATCGTTGGTCTCCATCAGAATACCTCGATTGGATCCACTGATATAACTGATACATGGGAACCCTTAGAGGAAGGCCTTCTTCCGCTGGAAACCACAAGACATGTGTCAATGATCACAATAACCCTTTCAAAGAAGGAGCTGAATACTTCCTCCATTGGGTACCAGCCCCCATTACCAGCTGAGCAGGTGAAGGCATGGACAGAATTTGACTATGAAGGAGAGGGTTCACCTAGTGGTCGAGGTAGAGGCCGTGGTGGTAGAGGGAGGGGAAGGACTAGAGGTGTATCTGGGAATGGTTTTGTGTCTGCCGAGTATGAGGATGGTGGTTGGGATCGGAATCGTGGATATGCTAGGGGGAGGGGTCGAGGCAGAGGTCGTGGTTTCCGTGGCCGTGGAAGAGGTGGGTATAACGGCCCTCAGGTTGATGCTCAGCAGGATATGGGAGGCTACAATCAAGAGCCTCCATTTCAAGGCCGCGGTCGTGGTCGTGGGAGGGGAAATCGTGGAAGGGGTCGTGGTGCTAGATCTAATGGGCCGATCCATGCAACTGCCGGAGGCGCTTAA 774 0.509 MDRYQRVEKPREETPIDENEIRITSQGRMRSYITYAMSLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELNTSSIGYQPPLPAEQVKAWTEFDYEGEGSPSGRGRGRGGRGRGRTRGVSGNGFVSAEYEDGGWDRNRGYARGRGRGRGRGFRGRGRGGYNGPQVDAQQDMGGYNQEPPFQGRGRGRGRGNRGRGRGARSNGPIHATAGGA* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0193 257 Gene3D - 14 118 IPR036882 GO:0003676
Vvi18g0193 257 FunFam DNA/RNA-binding protein Alba 1 15 117 - -
Vvi18g0193 257 MobiDBLite consensus disorder prediction 141 170 - -
Vvi18g0193 257 PANTHER RIBONUCLEASE P SUBUNIT P25 1 246 - -
Vvi18g0193 257 Pfam Alba 19 83 IPR002775 GO:0003676
Vvi18g0193 257 SUPERFAMILY AlbA-like 16 129 IPR036882 GO:0003676
Vvi18g0193 257 MobiDBLite consensus disorder prediction 183 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0193 Vvi-Chr18 1752801 1757746 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0193 - - vvi:100254082 397.127