Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0188 ATGCCATGGCTTGCAGTTCCGTTTTCTGATTTGGAGACAAAGAAAGCCTTGAACCGGAAGTTTGACATTGAAGGTATTCCTTGCTTAGTTATATTGCAACCTAATGATAATAAGGATGAAGCAACATTGCACGATGGGGTTGAACTCATTTATCGGTATGGGGTCAATGCATTTCCATTCACTAAAGTGAGGTTGGAGGAATTGCGTAAGGAAGAGAGGGAGAAGCATGAGAGCCAAACCCTACCCAATTTACTAACAAACCACAATAGAGACTTTCTCTTGGGTCGTCCCACAGCTAAACAGGTGCCTATTTCTTCTTTAATAGGCAAGACAATCGGACTCTACTTCTCAGCTCAATGGTGTCTTCCAGGCGTGAAGTTCACTCCCAAACTGATTTCCATCTACCAGAAGATAAAGCAAACGCTGGTGGATGACAACGAGGAGGATTTCGAAATAGTTTTCGTGTCAAGTGACCGTGACCAACCTTCATTCGACTCCTACTTTGGCACCATGCCATGGCTAGCAGTGCCCTTTGGAGACCCAACCATCAAAACCCTCACCAAGTACTTCGATGTTCAGGGAATTCCCTGTTTGGTCATTCTGGGCCCGGACGGTAAAACCGTGACAAAGCAAGGGAGGTACCTTATAAATCTGTACCAAGAAAACGCCTACCCTTTCACCGAGGCTAAATTGGAGCTGCTAGAGAAGCAAATGGACGAAGAGGCTAAGAGCCTTCCTCGTTCGGAGTACCACGCAGGGCACCGCCACGAGCTCACTCTGGTGTCCGAAGGCACAGGAGGCGGACCCTTTATCTGCTGTGACTGCGACGAGCAAGGCTTGGGGTGGGCGTACCAATGCCTTGAATGTGGGTATGAGGTGCACCCCAAGTGCATGAGAGTTGTGGACCGTGGCTCCACTCTGGAAAGGTGA 930 0.4849 MPWLAVPFSDLETKKALNRKFDIEGIPCLVILQPNDNKDEATLHDGVELIYRYGVNAFPFTKVRLEELRKEEREKHESQTLPNLLTNHNRDFLLGRPTAKQVPISSLIGKTIGLYFSAQWCLPGVKFTPKLISIYQKIKQTLVDDNEEDFEIVFVSSDRDQPSFDSYFGTMPWLAVPFGDPTIKTLTKYFDVQGIPCLVILGPDGKTVTKQGRYLINLYQENAYPFTEAKLELLEKQMDEEAKSLPRSEYHAGHRHELTLVSEGTGGGPFICCDCDEQGLGWAYQCLECGYEVHPKCMRVVDRGSTLER* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0188 309 SUPERFAMILY Cysteine-rich domain 238 299 IPR046349 -
Vvi18g0188 309 PANTHER THIOREDOXIN 1 283 - -
Vvi18g0188 309 ProSiteProfiles Thioredoxin domain profile. 70 239 IPR013766 -
Vvi18g0188 309 Pfam C1 domain 254 298 IPR004146 -
Vvi18g0188 309 Pfam Thioredoxin-like 1 36 IPR012336 -
Vvi18g0188 309 Pfam Thioredoxin-like 109 206 IPR012336 -
Vvi18g0188 309 SUPERFAMILY Thioredoxin-like 91 210 IPR036249 -
Vvi18g0188 309 Gene3D Glutaredoxin 87 227 - -
Vvi18g0188 309 Gene3D Glutaredoxin 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0188 Vvi-Chr18 1712228 1713768 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0188 K17609 - vvi:100262541 640.188