Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0183 ATGGCGAAAGGGAGGTATTCTAGGGGACATGGCAAGAGGTGGTCGACATTAGCGCTCGTTCTTTCGCTGCTTCTTATGCTAACAGTTGTTCTGCTCATGCTTCTCGCTCTCGGAATCGTCTCATTGCCGATCGGCACGGTAGATTCCGATGCGGCCAACGATCTGAGCTCTTTCAGGCGCAAGACGTTCGATGGAGGTGAAGGATTGGGGAAGAGAGGAGAGCAGTGGACGGAAATTGTCTCCTGGGAGCCCAGAGCTTTCATTTATCACAATTTCTTGTCCAAGGAAGAATGTGAGTACATGATAAGTCTTGCCAAACCTTATATGAAAAAGTCAACTGTTGTTGATAGTGAAACTGGTCGGAGCAAAGATAGCAGGGTGCGTACCAGTTCTGGAATGTTTTTGAGGAGAGGGCGAGATAAAATCATCAGGGACATAGAGAAAAGAATAGCTGACTTCACTTTCATTCCCGTAGAGCATGGAGAAGGACTTCAGGTTCTCCACTATGAAGTTGGGCAGAAGTATGACGCTCACTATGATTACTTCCTTGATGAGTTTAACACTAAAAATGGTGGCCAACGGATAGCTACTCTTCTTATGTATCTGTCAGATGTTGAAGAAGGTGGGGAGACTGTGTTTCCAGCTACCAAGGCAAATTTCAGTTCTGTGCCATGGTGGAATGAGTTATCTGAATGTGGTAAAAAGGGCCTTTCTGTGAAACCAAAGATGGGTGATGCATTGCTTTTCTGGAGCATGAGGCCTGATGCCACACTAGATCCTTCAAGTTTGCATGGCGGTTGCCCTGTGATTAAAGGTAACAAGTGGTCATCAACAAAGTGGATGCATGTAGAGGAGTACAAAGCCTAG 867 0.4602 MAKGRYSRGHGKRWSTLALVLSLLLMLTVVLLMLLALGIVSLPIGTVDSDAANDLSSFRRKTFDGGEGLGKRGEQWTEIVSWEPRAFIYHNFLSKEECEYMISLAKPYMKKSTVVDSETGRSKDSRVRTSSGMFLRRGRDKIIRDIEKRIADFTFIPVEHGEGLQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRIATLLMYLSDVEEGGETVFPATKANFSSVPWWNELSECGKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIKGNKWSSTKWMHVEEYKA* 289
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0183 288 Gene3D q2cbj1_9rhob like domain 77 283 - -
Vvi18g0183 288 SMART p4hc 84 282 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vvi18g0183 288 FunFam Prolyl 4-hydroxylase 4 76 283 - -
Vvi18g0183 288 Pfam 2OG-Fe(II) oxygenase superfamily 164 282 IPR044862 -
Vvi18g0183 288 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 283 IPR005123 -
Vvi18g0183 288 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 64 284 IPR045054 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi18g0183 Vvi-Chr18 1670640 1675832 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0183 K00472 - vvi:100252283 552.362