Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0182 ATGGCTTGGCGGCCACAGGAGGAAGGTCTCGGAGAGATATGCGGTTTGCTGGAACAACACATTTCTCCTACTTCGGATAAGTCTGTGATTTGGAAACAGCTTCAACATTATAAACAATTCTCTGATTTCAATAACTATCTCGCCTTCATCTTTGCCCATGCGGAGGGCAAATCAGTTGAAATTCGTCAGGCAGCTGGTCTACTGCTGAAAAATAATCTCAGAAGTTCTTTCAGAACTTTAGATCCTGCACATCAACAGTATATAAAATCAGAATTGTTGCCTTGTTTAGGAGCGGCAGATAAGCACATAAGATCTACAGTTGGGACAATTATTACTGTTATTGTCCAACAAGGAAGAATTTTTGGTTGGCCGGAATTGTTGCAAGCCCTTGTGCATTGCTTGGATAGTAATGACCTCAACCTTATGGAAGGTGCTCTGGCTGCTTTATTAAAGATTTGTGAAGACATTCCACAAGAGCTTGATTCAGAAATACCTGGATTAACTGAACGCCCCATCGATGCTTTCTTGCCCAGATTGTTCCAGCTATTCAAGTCACCTCATGTCTCTATACGGAAGCTTTCACTGGGATCAATAAATCAGTTCATTATTCTGATGCCCACTGCTTTATTCATGTCCATGGATCAATGCCTCCAAGGTTTGTTTGTTCTTGCTCATGACCCTATTGCAGAGATTCGAAAATTGGTTTGTGCTGCTTTTGTCCAGCTGGTTGAAGTTCAGCCTGCTGTCCTGGAGCCACATATGAGGAATATAATTGAATACATGTTGCAAGCCAACCGGGACGCTGATGATGAAGTTGCTCTTGAGTCTTGTGAATTTTGGTCAACCTACTGTGAAGCGCAGTTAGATCCTGAACTTTTAAGAGAATTCTTACCACATCTGATTCCAGTTCTGTTGTCAAATATGGCTTATGCTGAGGATGATGAGTCACTTGCTGATGCAGAGGAGGACGAGTCTATCCCGGATAGAGATCAGGATCTGAAGCCTCGCTTCCATTCATCACGATCACATGGACTAGATGATATGAAGGACGATGATGATGAAGCTGTCAATATTTGGAACTTGAGAAAATGCAGTGCAGCAGGTCTTGATATCCTTTCAGATGTGTTTGGGGATGAGATTCTTCCAACATTGATGCCTTTAGTTCAGGCTAAGCTATCCACCTCAGATGCTAGGTCCTGGAAGGAAAGGGAAGCTGCAGTTTTAGCCCTTGGTGCCATAGCTGAGGGTTGCGTTAGAGGTCTTTTCCCTCATTTGGCAGAGATTGTGGCTTTTCTCATCCCCCTTTTAGACGATAAATTTCCTTTGATACGAAGTATTACTTGCTGGACCCTTTCTCGGTTTAGCAAATTCATTGTTCAGGGTGTTGGTCATCAAAAAGGCTATGATCAGTTCAACCGGGTCCTCGTGGGTCTTCTACAAAGAGTCTTAGACACTAACAAGAGGGTACAAGAAGCTGCATGTTCAGCTTTTGCTACTCTTGAAGAGGAGGCTGCAGAAGAGTTGACACCACATGTAGCAATCATTTTACAACACCTTTTATGTGCTTTTGGGAGATATCAGAAAAGGAACCTCCGAATTTTATATGATGCTATAGGCACTTTAGCAGATGCTGTTGGAGGAGAACTGAATCAGTCCAGATACCTTGATATTCTGATGCCTCCATTAATTGCAAAGTGGCAGCTAGTTTCCAATTCAGACAAAGACCTCTTTCCACTGCTAGAGTGCTTTACATCTATAGCACAGGCATTAGGTACTGGGTTTTCGCAATTTGCTGAACCAGTATTCCAGAGGTGCATAAGCATCATCCAATCTCAACTGCTAGCAAAGGCCTCGGTTGATCCTCTGTCAGCTGCTGTTCAATATGATAAAGAATTCATTGTTTGCTCTTTGGACTTGCTCTCAGGGCTTGCAGAAGGTCTTGGTAGTGGAATTGAGAGCTTGGCTGCACAAAGCAATTTAAGGGACCTACTTCTGCAATGCTGTATGGATGATGCTTCTGATGTTTGTCAAAGTGCTCTTGCCCTTCTTGGGGACCTTGCAAGAGCCTGTCCAGTTTATTTGCATCCGCGTCTCTCTGAATTCCTCAATGTTGCAGCCAGACGATTGAATCCTCCTGAGGTAAAGGAAACTTTTTCAGTGGCAAACAATGCATGTTGGGCGATTGGAGAACTAGCAGTGAAGGCTCACAAAGAAGTTTCCCCAATTGTGATGACAGTTGTCTCGTGCCTAGCTCCAATCCTTCAACAGGCAGAGGGTTTTAATAAGTCACTTGTGGAAAATAGTGCCATCACCCTTGGGAGGCTTGCTTGGGTCTGCCCAGAGATTGTAGCACTGCATATGGAGCATTTTATGCAGTCATGGTGTACTGCTTTATCCACGATACGTGATGATATTGAGAAGGAAGATGCCTTCCGTGGTCTATGTGCAACTGTTAGAGCAAATCCATCTGGGGCTTTGAGTTCACTTGTGCACATGTGCAAAGCTATTGCAAGTTGGCATCATATAAGGAGTGAGGATCTGCACAATGACATCTGCCAAGTTTTGAAAGGATTTAAGCAGATGCTTAACAATGGAGCATGGGAACAGTGCATGTCTGCATTGGAGCCCCCAGAGAAGGAGAAACTGTTGAACTACCTAATATAA 2664 0.4362 MAWRPQEEGLGEICGLLEQHISPTSDKSVIWKQLQHYKQFSDFNNYLAFIFAHAEGKSVEIRQAAGLLLKNNLRSSFRTLDPAHQQYIKSELLPCLGAADKHIRSTVGTIITVIVQQGRIFGWPELLQALVHCLDSNDLNLMEGALAALLKICEDIPQELDSEIPGLTERPIDAFLPRLFQLFKSPHVSIRKLSLGSINQFIILMPTALFMSMDQCLQGLFVLAHDPIAEIRKLVCAAFVQLVEVQPAVLEPHMRNIIEYMLQANRDADDEVALESCEFWSTYCEAQLDPELLREFLPHLIPVLLSNMAYAEDDESLADAEEDESIPDRDQDLKPRFHSSRSHGLDDMKDDDDEAVNIWNLRKCSAAGLDILSDVFGDEILPTLMPLVQAKLSTSDARSWKEREAAVLALGAIAEGCVRGLFPHLAEIVAFLIPLLDDKFPLIRSITCWTLSRFSKFIVQGVGHQKGYDQFNRVLVGLLQRVLDTNKRVQEAACSAFATLEEEAAEELTPHVAIILQHLLCAFGRYQKRNLRILYDAIGTLADAVGGELNQSRYLDILMPPLIAKWQLVSNSDKDLFPLLECFTSIAQALGTGFSQFAEPVFQRCISIIQSQLLAKASVDPLSAAVQYDKEFIVCSLDLLSGLAEGLGSGIESLAAQSNLRDLLLQCCMDDASDVCQSALALLGDLARACPVYLHPRLSEFLNVAARRLNPPEVKETFSVANNACWAIGELAVKAHKEVSPIVMTVVSCLAPILQQAEGFNKSLVENSAITLGRLAWVCPEIVALHMEHFMQSWCTALSTIRDDIEKEDAFRGLCATVRANPSGALSSLVHMCKAIASWHHIRSEDLHNDICQVLKGFKQMLNNGAWEQCMSALEPPEKEKLLNYLI* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0182 887 ProSiteProfiles Importin-beta N-terminal domain profile. 30 98 IPR001494 GO:0006886|GO:0031267
Vvi18g0182 887 PANTHER IMPORTIN BETA 17 863 IPR040122 GO:0006606
Vvi18g0182 887 SMART IBN_N_2 30 98 IPR001494 GO:0006886|GO:0031267
Vvi18g0182 887 FunFam Transportin-1 1 887 - -
Vvi18g0182 887 MobiDBLite consensus disorder prediction 327 348 - -
Vvi18g0182 887 Pfam HEAT-like repeat 400 453 - -
Vvi18g0182 887 Gene3D - 1 886 IPR011989 -
Vvi18g0182 887 Pfam Importin-beta N-terminal domain 31 97 IPR001494 GO:0006886|GO:0031267
Vvi18g0182 887 MobiDBLite consensus disorder prediction 316 348 - -
Vvi18g0182 887 SUPERFAMILY ARM repeat 1 880 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0182 Vvi-Chr18 1623782 1667243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0182 K18752 - vvi:100245339 1726.45