Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0179 ATGGAGGGTCTTAATGGTCTTTTAGCTTGTCAAGACTGTTCACTGCCCTCGTGGCTTGTGGAAGTAACCGCTAACGCGCTCTTCCTGGACTTTGAAAGGCCGGAGGAGAAGGGAAGAGAGGAGTCACCGGAGTTACCGGAGTCACCACCCTTGTTTTCCCTAAGAGGGGAACTGGTTATGGTTCTCCTCTTGGATTTGCAGGATTTCCTTCTCCGTGCTCGAGTGCTGAAGCTGTACAGGCAGGCACTAAGAGTTGCTGGAAGAGCCCCTGAACATGCTAGAGCTGAATTGAGACAGACTGTTAGACAAGAAATGGAGAATAACAGGAACTGCAATGACAAACAGAGGATCCGTTTTTTGATCAGTGAAGGATTGGCGAGATTGAAAGGTCTGGATGAAATGCTTGATATGCAGGGTCATTGA 423 0.4846 MEGLNGLLACQDCSLPSWLVEVTANALFLDFERPEEKGREESPELPESPPLFSLRGELVMVLLLDLQDFLLRARVLKLYRQALRVAGRAPEHARAELRQTVRQEMENNRNCNDKQRIRFLISEGLARLKGLDEMLDMQGH* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0179 140 CDD Complex1_LYR_LYRM2 72 131 IPR045293 -
Vvi18g0179 140 Coils Coil 94 114 - -
Vvi18g0179 140 Pfam Complex 1 protein (LYR family) 74 129 IPR008011 -
Vvi18g0179 140 PANTHER LYR MOTIF-CONTAINING PROTEIN 2 67 140 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0179 - - vvi:100242024 256.144