Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0175 ATGGCTACAATCGCGAACTTCTTGTCTAAGCCCCCTTCATCTCTGCCCCCTAAAATCAATGCTTTGTCCTCCGTTTTTTCATCTTCTCTGTCCTTTACAAAACCCAGACCCCTAATGATGAAACTTGGAACAAGCAGAAGCACTAACAGCTTCACAGTGAAAGCCACAGCGGCACCAAGCAAGACTAAGAAAGCCGAGAGTGATGAGAGAGTAAAACATGTCCACAGCATAGAGGAGTTCGACGAAGCCCTTCGAACGGCGAAAAACAAGCTGGTGGTGGTGGAATTCGGCGCCAGCCACAGCATCCACAGCAAAAAAATCTACCCTTTCATGGTGGACCTCAGCCGCCAATGCAGCGACGTGGAGTTTTTATTAGTAATGGGCGACGAATCGGAAAAAACCAGAGAACTCTGCCAGAGGGAGAACATCGACCAAGTCCCACACTTCAGCTTCTACAAGAACAAGGAGAAGATCCACGAGGAAGAAGGGATCGGCCCAGATGAGCTGATGGGAGACGTGCTATACTACGGAGACAACCACTCGGCTGTGGTGCAACTGCACTCGGGAGAAGATGTGGAGCGGCTGATCCAAGACCATAAAGCTGACAACAAGCTCATAGTTCTGGATGTGGGATTGAAGCACTGTGGGCCCTGCGTGAAGGTGTATCCAACGGTGATTAAGCTCTCAAGGCAGATGACTGATACGGTGGTGTTCGCCAGAATGAACGGGGATGAGAACGATAGCTGCATGAAGTTCTTGAAGGAGATGGACGTTGTAGAGGTGCCCACGTTTTTATTTATAAGAGATGGTGAGATCTGTGGAAGGTACGTGGGTTCTGGGAAAGGAGAGCTTATCGGGGAAATTCTTAGATACCAAGGAGTTCGTGTTACCTATTAA 897 0.4894 MATIANFLSKPPSSLPPKINALSSVFSSSLSFTKPRPLMMKLGTSRSTNSFTVKATAAPSKTKKAESDERVKHVHSIEEFDEALRTAKNKLVVVEFGASHSIHSKKIYPFMVDLSRQCSDVEFLLVMGDESEKTRELCQRENIDQVPHFSFYKNKEKIHEEEGIGPDELMGDVLYYGDNHSAVVQLHSGEDVERLIQDHKADNKLIVLDVGLKHCGPCVKVYPTVIKLSRQMTDTVVFARMNGDENDSCMKFLKEMDVVEVPTFLFIRDGEICGRYVGSGKGELIGEILRYQGVRVTY* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0175 298 ProSiteProfiles Thioredoxin domain profile. 52 201 IPR013766 -
Vvi18g0175 298 Pfam Thioredoxin 198 283 IPR013766 -
Vvi18g0175 298 Pfam Thioredoxin 74 167 IPR013766 -
Vvi18g0175 298 SUPERFAMILY Thioredoxin-like 176 285 IPR036249 -
Vvi18g0175 298 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 1 298 IPR044192 GO:0016671
Vvi18g0175 298 Gene3D Glutaredoxin 59 175 - -
Vvi18g0175 298 Gene3D Glutaredoxin 176 292 - -
Vvi18g0175 298 SUPERFAMILY Thioredoxin-like 64 168 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0175 Vvi-Chr18 1569400 1570296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0175 - - vvi:100259132 575.859