Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0174 ATGGATTCACTCACTCTTTTCTGTACGGCGGCTCTTTTGGCCGGCGGCCTCTACTGGTTCGTCTGCATTCTTGGGTCAGCAGAACAGACGGGAAAGAGGGGCGTGGATCTCTCCGGCGGGTCGATCTCGGCGGAGAAGGTTCAAGACAAGTACAAACAGTACTGGTCCTTCTTTCGCCGACCCAAAGAAATCGAAACCGCCGAGAAAGTGCCTGACTTTGTAGATACATTCTACAATCTCGTCACAGACATCTACGAATGGGGATGGGGCCAGTCCTTCCACTTCTCTCCCGCCGTCCCGGGGAAGTCCCACCGTGACGCCACGCGCCTCCATGAGGAGATGGCGGTGGATCTCATCGACGTAAAGCCCGGAGATCGAATCCTGGACGTTGGATGCGGAGTGGGAGGTCCTATGCGCGCAATCGCGGCTCACTCGCGGGCCAATGTTGTGGGGATCACCATCAATGAGTACCAAGTGAATCGCGCCCGCTTGCACAACAGAAAGGCCGGGTTGGACTCGCTCTGCGAAGTCGTGTGTGGCAATTTCCTCCAGATGCCGTTCGCTGACAACAGCTTCGACGGCGCGTACTCCATCGAAGCTACGTGCCACGCGCCGGAGCTCGAAGAAGTCTACGCCGAGATCTTTAGGGTTTTGAAACCCGGATCTATGTACGTGTCCTACGAATGGGTTACAACGGACAAGTTCAAAGCAGAAGATCCAGAACACGTGGATGTCATTCAAGGCATCGAGAGAGGTGATGCTTTGCCTGGCCTGAGGCCCTACTCCGACATCGCTGCGACGGCGAGGAAGGTAGGGTTCGAGGTGGTGAGAGAGAAGGATCTGGCGAAACCACCGGCGATGCCATGGTGGACAAGGTTGAAGATGGGTAGGATTGCCTACTGGAGGAACCACATTCTGATTATGATATTCGCCGCCTTGGGAATCGCACCAAAGGGAACTGTGGATGTTCATGAGATGCTGTTCAAGACAGCTGATTATCTCACAAGAGGCGGCGAGTCCGGAATTTTCACTCCAATGCACATGATCCTCTGCAGAAAACCTGAATCCTCAGAACACGATTGA 1083 0.5466 MDSLTLFCTAALLAGGLYWFVCILGSAEQTGKRGVDLSGGSISAEKVQDKYKQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPAVPGKSHRDATRLHEEMAVDLIDVKPGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNRKAGLDSLCEVVCGNFLQMPFADNSFDGAYSIEATCHAPELEEVYAEIFRVLKPGSMYVSYEWVTTDKFKAEDPEHVDVIQGIERGDALPGLRPYSDIAATARKVGFEVVREKDLAKPPAMPWWTRLKMGRIAYWRNHILIMIFAALGIAPKGTVDVHEMLFKTADYLTRGGESGIFTPMHMILCRKPESSEHD* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0174 360 FunFam Methyltransferase 44 305 - -
Vvi18g0174 360 Gene3D Vaccinia Virus protein VP39 44 306 IPR029063 -
Vvi18g0174 360 Pfam Sterol methyltransferase C-terminal 291 355 IPR013705 GO:0006694|GO:0008168
Vvi18g0174 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Vvi18g0174 360 CDD AdoMet_MTases 126 230 - -
Vvi18g0174 360 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Vvi18g0174 360 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Vvi18g0174 360 PANTHER - 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0174 Vvi-Chr18 1565636 1566718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0174 116 280 Acyl Lipid Metabolism Gene Families AT1G73600 29.091 3.46e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0174 K08242 - vvi:100254003 745.732