Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0173 ATGGAAAAGCTTTCTGGGTTGAGACACCTATTTATGACTGTTTTTCTCTTCAATTTCGCCACGTTCATGGTGATTCCGGCCATCACCGACGTCACTATGGCTGCGCTTTGTCCCGGAAGAGATGAGTGCTCCATCGCCATTTACCTCACCGGATTTCAACAAGTGATAATAGGATTGGGAACCCTGGTGATGATGCCTCTGGTGGGTAATCTGTCGGATATGTATGGGAGGAAGGCTTTGCTCACGATCCCAATGTGTCTCACTATTATCCCCTTAGCGATATTAGCTTGGAGTAGAAGCAGGAATTTTTTTTACGCGTACTTCGTGCTGAAGACGCTTACTTCTATGGTTTGCGAAGGAAGCGTACACTGCCTCACCCTGGCTTATGTGGCGGATAATATTCCGGAGATTCGACGAGCGTCAGCATTTGGAGTTCTTTCCGGCGTTGGATCATCTGCATTCGTTTGCGGGACTCTCTCTGCTCGTTTTCTCAAAACTTCTTCCACGTTTCAGGTTGCGGCGTCGGTTGCGGCGGTGGCGGCTGTGTACATGAAGCTGTTCCTTCCGGATTCGGTCATAAAGGACGGCGTTTTGGATCGGGCAATCTTAGAGCAAAAGCCTTGTGTCATTCATTTGGATGGGGAATCCGCTCAGGACTCGCCAGTATTCAAATCAATGCCATCGCTGGATGATATGCTCTCCTTGTTGCAGACCAGCTCCACGTTTACAAAAGCCGCAATTGTCGCTTTCTTCAGCAATCTTGGGGACGTTGGCCTTCATACTTCGTTAATGTACTACTTAAAGGCCCGCTTTCACTTCAACAAGCACCAGTTTGCGGACTTGATGATGATTTCTGGGATTGCAGGCACAATATCACAACTGGTTCTTATGCCCATATTGGCTCCCACCATAGGAGAGGAGAAGCTGCTCGCAATAGGGCTCCTCTTTAGCTGTTCACATATGTTTCTTTACAGCATCGCCTGGTCCTTCTGGGTCCCTTATGCAGCCGCTATGTTCTCCATTTTGATTGTTTTTGCGCCACCATGCATTCGGAGCATAGCATCCAAACAAGTCGGTCCCAGTGAGCAGGGGAAGGTGCAAGGGTGCATTTCGGGCATATCTTCCTTTGCTCATCTCGTTTCTCCCTTGGCTTTCACTCCTCTGACTGGTGATTGGAACTTCGATTTTGGGCCCTTTTTTTTGTTCTCCTGA 1212 0.4851 MEKLSGLRHLFMTVFLFNFATFMVIPAITDVTMAALCPGRDECSIAIYLTGFQQVIIGLGTLVMMPLVGNLSDMYGRKALLTIPMCLTIIPLAILAWSRSRNFFYAYFVLKTLTSMVCEGSVHCLTLAYVADNIPEIRRASAFGVLSGVGSSAFVCGTLSARFLKTSSTFQVAASVAAVAAVYMKLFLPDSVIKDGVLDRAILEQKPCVIHLDGESAQDSPVFKSMPSLDDMLSLLQTSSTFTKAAIVAFFSNLGDVGLHTSLMYYLKARFHFNKHQFADLMMISGIAGTISQLVLMPILAPTIGEEKLLAIGLLFSCSHMFLYSIAWSFWVPYAAAMFSILIVFAPPCIRSIASKQVGPSEQGKVQGCISGISSFAHLVSPLAFTPLTGDWNFDFGPFFLFS* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0173 403 Pfam Major Facilitator Superfamily 10 382 IPR011701 GO:0022857|GO:0055085
Vvi18g0173 403 Gene3D MFS general substrate transporter like domains 7 403 IPR036259 -
Vvi18g0173 403 CDD MFS_SLC46_TetA_like 10 403 - -
Vvi18g0173 403 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 403 IPR020846 GO:0022857
Vvi18g0173 403 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 7 392 - -
Vvi18g0173 403 SUPERFAMILY MFS general substrate transporter 9 401 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0173 Vvi-Chr18 1551187 1554498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0173 2 400 Organic Solute Cotransporters AT2G16990 45.012 1.86e-110 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0173 - - vvi:100252243 750.355