Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0158 ATGCCGCAGCAATTTGGTGGGGATTTGCAGTATTTGGTCGAATCGGGGGAGGAACTGTTGTTGGTTACTAGGTATCTAGATCTTACATATGATGTTGAGCCTGATCAGACTAGTCTGATCTATAGAACAACGCGGTTCCAAGTTTGTAGGCTAGATTTGAAAGCCCCAAGGTGGGAGGTGGTGAGCAGCCTGGGCGATCGGGCATTGTTTCTAGGGGAAAATTTGTCATTGTCTTTGTCATCTGTGGATTTTCCGGGATGTAAAGGGAATTGCATCTATTATACGGATGATTATTCTGAGGATAATTATGATGGCATTGGTGGTGAACAGGATTTAGGCATTTTCAACTTAGAAGATGGCAGCATCGAACCATTACCATGTTCACATTTTCGGATACGCTGGCCTCCACCACTCTGGGTTACGCCCAATCCATGTTGA 438 0.4498 MPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNPC* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0158 145 Pfam Protein of unknown function (DUF295) 61 117 IPR005174 -
Vvi18g0158 145 PANTHER F-BOX PROTEIN SKIP23 7 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0158 Vvi-Chr18 1440188 1440625 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0158 - - vvi:100250576 310.071