Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0152 ATGCATCATGAAACCGAAGATGCGCATGCTAGCAACGGCCATGAGGCGGTGGCGAAAGTTAGCTCCGCCGCCGAGGACCGGCGGATGATCGCCGGCGAAGATGATATGCGAATTCTGAACGATGCCGTCAGTAAAGTATCTCCGCACGCGGTGAAGGATTTGTTGTCTCTCGGGATATGCATTGGATGCATCTTTCGGCTATCTGGGGTTCGTGGGCATATTTTTTCTTGCCCCTCACTCTTGCTGTCAATCTTACATCCAGTGATTGGTGAACCAACAGATTCAAGCACACATCGATACACTGGAATTGGAGGAAATGAAGACTCTGGTGCTGCCCATTCTTCTCAAGAATCAGAATGTGAGCCAGTGATTTGCAGCATTTGTTTAGGTGTTTTGCAGTTCACTTATTTTGATGACAAAAAAATGTTGGTGAAAAAGGATTCTGCTGATGAGTTAGCTGTGTCAATTGCTAACCTGGTAAAGAAAGAGGGCCATGAGTTTGATAACTTCTCTCTGGAAGTCTCTATACCACCTGTTATCGCGGAAAATGAACATGTAGTCTTGTTGTATATGAAGAAGAAGTATGGATCTGAACTGTGGTTCCAAGAAAAGTTTCTATCTGAGAGGATTTCTGCCAAGGATGCCTTAAAATTATCTTTATGTAATCCCCTTGAAAAATTATTGGATGTTAAATCTTCTGGTTCAAGCACTTTCCGCATCCGTTTGACATATGCTCAACCCAGAGCATCAGGAAAGAACCAAAATATCACGGAGAGGAGCCAGGGATGCAAAAGAAGGAGAACAGGCACTGAGAACATCTTCAGTACTGTTCATGGGTCCGTGGTTGATGGCATAGAGTGCTCAGATATTTCTACCAGCGAAGCAGATGCAGGAATTAGAAAGCCTTCTGATGGTCTGCAAGATAACGAAAATTCTGACTGCTTCAAATTCCCACTAGAGAAGGTCAACCAACCATGCCATTTGGCATTTCTTTGCTACAGGACACACATCTACATTGGTGGGAGATACCTAAAGTACTCAAGAAATGTGAGTCAAACACGTTGGATCATTGATGATGAAAGAATGGGTGAAGCATCTGTTGAGGAAATAATAGGTGGCAACATTCTTCCCATGTGTCTGGGTGATAATTACAAGTTCCATGCTGCTGGTAGAGAGGATATCAATGTCCGGATGTTGGGTTCAGGCCGTCCTTTTCTTGTTGAGATACAAAATTCTCGCCATGTCCCATCTGAGGCACTCATAAAAGAAATAGAAGTGAAGATAAATAACTTGGAAAATAAATTAGTTAGGGTAAAAAATCTTAAACTGGTAGACAGCCATGGGTGGAGCCTAATGCAAGAAGGAGAGGAAGAGAAGCAGAAGCAATATGCTGCACTAGTATGGATTGATCGCCCTCTAAAAGATGAAGACATGCAGGCTATATCTTCACTGAAAGACAAGAAAATTTTGCAGAGAACTCCAATAAGGGTGCTTCACCGACGAAGTCCATTAGAACGTGAAAAGATTATACATTGGATGAAAATTGAAAAGATTGCTGGCAGTTCTCAATATTTTCTTTTGCACCTATGTACCCAGGCTGGAACATATATCAAGGAATTTGTTCACGGTGATCTTGGACGCACCCATCCTAGTGTTGGTTCCATTCTAGGTTGCCGAGCTGAGATCCTTCAACTTGATGTTACAGAGGTGAAAATGGACTGTTTTCTGGATGAATGA 1737 0.4272 MHHETEDAHASNGHEAVAKVSSAAEDRRMIAGEDDMRILNDAVSKVSPHAVKDLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVIGEPTDSSTHRYTGIGGNEDSGAAHSSQESECEPVICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEFDNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQEKFLSERISAKDALKLSLCNPLEKLLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGSGRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQEGEEEKQKQYAALVWIDRPLKDEDMQAISSLKDKKILQRTPIRVLHRRSPLEREKIIHWMKIEKIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTEVKMDCFLDE* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0152 578 FunFam tRNA pseudouridine synthase Pus10 461 571 - -
Vvi18g0152 578 NCBIfam tRNA pseudouridine(54/55) synthase Pus10 336 571 - -
Vvi18g0152 578 Coils Coil 421 441 - -
Vvi18g0152 578 Gene3D - 336 460 - -
Vvi18g0152 578 Gene3D - 461 571 - -
Vvi18g0152 578 FunFam tRNA pseudouridine synthase Pus10 336 460 - -
Vvi18g0152 578 MobiDBLite consensus disorder prediction 1 23 - -
Vvi18g0152 578 SUPERFAMILY Pseudouridine synthase 453 571 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Vvi18g0152 578 PANTHER UNCHARACTERIZED 36 574 IPR039894 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0152 K07583 - vvi:100242087 1162.9