Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0149 ATGAGGGTCCCTTCGTCTTCACTCGCCACATGCAGATTTGGAGGAAAAAATAAACATGAGCATGTGAGAATCAGACACGGTAACAATAGCCCGTCATGCCCCTTGGACCCCACCACCGACACCCACTTCTCCAATTCTCCTCCCCTTTCCTTCCCTTTTTCTCCTTATTTTCCCTCCATTTCCCTCTCACTATCTTCCTCTGTACCGCACTTTAAATATACACCATCCGTCCTCATTCACTACCCTTCTTTCTCCTTTAAAATCCTCTCCCACTTGCAACTCCCCACCATCACCATCGCTCAAGAAATGGCCCTGAATTCTTTCCGGGCCTTTCTATCTATCTTTTCTCTCCTCTTCACCATTGTCGCCGCTGAAGATCCCTACAGATTCTTCACCTGGAATGTCACATTCGGCGACATTTATCCTCTTGGTGTTCGTCAACAGGGAATCTTGATCAATGGCCAATTCCCAGGTCCTGATATCTACTCCGTTACCAACGATAATCTCATTATCAACGTCTACAACAGCTTGACTGAGCCTTTTCTACTCTCCTGGAGTGGCGTTCAACAGAGGAGGAACTCGTACGAAGATGGTGTGTACGGAACGACATGCCCAATCCCTCCGGGGAGGAACTTCACCTACATTCTCCAAGTGAAGGACCAAATCGGAAGCTTCTTCTACTTCCCTTCTCTTGATTTCCACAAGGCCGCCGGCGGTTTCGGCGGCATCCGAATCCTCAGCCGCCCTAGAATCCCTGTCCCCTTCCCCGATCCCGCCGGCGACATCACCGTCCTCATCGGAGATTGGTACAAAGCAAATCACACGACACTGAAGGCCATTCTAGACCGGGGTAAGAAGCTTCATTTTCCAGATGGGATCCTCATCAACGGCCGTGGTCCCAATGGAGTCTCTTTCACTGTGGAGCAAGGAAAAACATACAGGTTCAGGATATCAAATGTTGGGCTGCAAAATTCACTCAACTTCCGGATTCAAGATCACAAGATGGTGTTGGTTGAAGTGGAGGGAACACATACTCTCCAAACTACCTATTCCTCCCTTGATGTTCATGTTGGACAGTCCTACTCTGTGCTAGTGACTGCTGATCAGCCTGCCCAGGACTTCTACATTGTGGTCTCAACACGGTTCACCTCTCAGGTCCTCACCACCACCGGTATTCTCCGATACAGCAACTCTGCTGGTCCAGTCTCAGGCCCACCCCCAGGTGGACCCACCATCCAAATTGACTGGTCCCTTAACCAGGCTCGCTCTATCAGGACTAATCTTACAGCAAGTGGACCAAGGCCTAACCCACAAGGCTCTTACCACTATGGTATGATCACCACCTCCAGAACAATCAGGCTTGCAAGCTCTGCTGGTCAGGTCAATGGCAAGCAAAGATATGCTGTTAATAGTGTATCCTATGTCCCAGGGGACACACCCCTAAAAGTTGCAGACTTCTTCAAGATTGGAGGAGTTTTCCGTGTTGGAAGCATATCAGACAATCCTACTGGGGGAGGAGTATACCTTGATACTTCAGTTATGGGAGCTGACTTCAGAGCATTCGTAGAAATTGTGTTTGAAAATCCTGAGGACATCATACAGAGCTGGCACATCGATGGCTACTCTTTCTTTGTAGTCGGAATGGATGGAGGATTGTGGACAGCAAATAGTAGGAACCAGTACAATCTCCGTGATGCAGTTGCCCGTTCCACTACTCAGGTATATCCCAAGTCATGGACTGCAATTTACGTGGCACTCGATAATGTGGGAATGTGGAACGTGAGGTCTGAGTTCTGGGCAAGGCAATACCTAGGACAACAATTTTATCTACGGGTTTATTCGCCAGTAGAGTCTATCAGGGATGAATTCCCAATTCCAAAGAATGCACTGCTTTGTGGTAAGGCAAGTGGTCGACGAACAAGGCCCCTCTAA 1932 0.4871 MRVPSSSLATCRFGGKNKHEHVRIRHGNNSPSCPLDPTTDTHFSNSPPLSFPFSPYFPSISLSLSSSVPHFKYTPSVLIHYPSFSFKILSHLQLPTITIAQEMALNSFRAFLSIFSLLFTIVAAEDPYRFFTWNVTFGDIYPLGVRQQGILINGQFPGPDIYSVTNDNLIINVYNSLTEPFLLSWSGVQQRRNSYEDGVYGTTCPIPPGRNFTYILQVKDQIGSFFYFPSLDFHKAAGGFGGIRILSRPRIPVPFPDPAGDITVLIGDWYKANHTTLKAILDRGKKLHFPDGILINGRGPNGVSFTVEQGKTYRFRISNVGLQNSLNFRIQDHKMVLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDFYIVVSTRFTSQVLTTTGILRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMITTSRTIRLASSAGQVNGKQRYAVNSVSYVPGDTPLKVADFFKIGGVFRVGSISDNPTGGGVYLDTSVMGADFRAFVEIVFENPEDIIQSWHIDGYSFFVVGMDGGLWTANSRNQYNLRDAVARSTTQVYPKSWTAIYVALDNVGMWNVRSEFWARQYLGQQFYLRVYSPVESIRDEFPIPKNALLCGKASGRRTRPL* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0149 643 FunFam L-ascorbate oxidase homolog 128 249 - -
Vvi18g0149 643 Pfam Multicopper oxidase 135 248 IPR011707 GO:0005507
Vvi18g0149 643 Pfam Multicopper oxidase 262 397 IPR001117 -
Vvi18g0149 643 SUPERFAMILY Cupredoxins 445 634 IPR008972 -
Vvi18g0149 643 SUPERFAMILY Cupredoxins 255 435 IPR008972 -
Vvi18g0149 643 FunFam Monocopper oxidase-like protein 445 642 - -
Vvi18g0149 643 Pfam Multicopper oxidase 486 614 IPR011706 GO:0005507|GO:0016491
Vvi18g0149 643 Gene3D - 259 433 IPR008972 -
Vvi18g0149 643 FunFam Monocopper oxidase-like protein 259 433 - -
Vvi18g0149 643 PANTHER MULTI-COPPER OXIDASE 147 608 IPR045087 -
Vvi18g0149 643 Gene3D - 128 249 IPR008972 -
Vvi18g0149 643 CDD CuRO_3_AAO_like_1 478 597 IPR034275 GO:0005507
Vvi18g0149 643 Gene3D - 444 639 IPR008972 -
Vvi18g0149 643 CDD CuRO_1_AAO_like_1 130 245 IPR034273 GO:0005507
Vvi18g0149 643 SUPERFAMILY Cupredoxins 121 275 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0149 Vvi-Chr18 1351081 1356645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0149 - - vvi:100252389 1092.8