Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0146 ATGGGGGAAGCTGAGGTTAAGCCTAAGAAGGCTGGCCCTGTACAGTGCTCCATCTGTAGCCAGAGGAGAGCCGCTCTTAAGCGCCCCAAAACCCTAGAGCAGATTTGCAGGGAGTGTTTCTATGCTGTTTTTGAGGAAGAGATCCATAGAGTAGTCGTTGACAACCAACTATTCAAACCTGGTGAGCGCATTGCCATTGGAGCTTCTGGGGGAAAAGATTCCACAGTCCTTGCTTATGTATTATCAGAATTGAATCGCAGGCATAATTATGGCCTCGATCTCTTCCTTTTGTCAGTTGACGAGGGAATTACTGGGTACAGGGATGACTCACTTGAAACTGTCAAAAGAAACGAAATTCAGTATGGCCTGCCACTGAAGGTTGTATCTTACAAGGATTTGTATGGATGGACGATGGATGAAATAGTGAAGATGATAGGTTTAAAGAACAACTGCACATTTTGTGGTGTTTTTCGTCGTCAGGCTCTTGATCGTGGTGCTGCAATGTTGAAAGTAGACAAGCTTGCTACTGGACATAATGCAGATGATATTGCTGAAACTGTACTTTTAAACATATTACGAGGTGATATTGCCAGACTGAGTAGGTGCACTTCTATAATCACTGGTGAAGATGGACCAATTCCAAGATGCAAGCCTTTTAAGTATACCTATGAAAAGGAGATTGTTATGTATGCATATTTCAAAAGGCTAGACTACTTTTCCACCGAATGCATTTATTCTCCAAACGCATATCGTGGTTTTGCTCGTGAGTTCATTAAAGATTTGGAAAGGATCAGGCCCAGAGCTATACTTGACATCATCAGATCAGGTGAAAAGTTTAGGATATCCACTTCTGCAAAAATGCCAGAGCAGGGAACATGTGAACGGTGTGGTTATATTTCTAGCCAGAAATGGTGTAAAGCTTGTGTTTTGCTGGAAGGATTGAACCGCGGTTTGCCAAAGTTGGGTATTGGGCGGACTCGAGGCCTCAATAATGGTCTTGAGTGCGATACAAAACAATCCAATGGAGTGAAGAATATCCAGAGCAAACAATGTGGAACTTTGGATTTCTGA 1071 0.4276 MGEAEVKPKKAGPVQCSICSQRRAALKRPKTLEQICRECFYAVFEEEIHRVVVDNQLFKPGERIAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNADDIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKLGIGRTRGLNNGLECDTKQSNGVKNIQSKQCGTLDF* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0146 356 NCBIfam TIGR00269 family protein 213 313 IPR000541 GO:0000049|GO:0002098|GO:0034227
Vvi18g0146 356 PANTHER ATPASES OF THE PP SUPERFAMILY-RELATED 14 338 - -
Vvi18g0146 356 Pfam Zinc-ribbon 291 321 IPR032442 -
Vvi18g0146 356 CDD Alpha_ANH_like_II 63 249 - -
Vvi18g0146 356 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 50 280 - -
Vvi18g0146 356 Hamap Cytoplasmic tRNA 2-thiolation protein 1 [CTU1]. 14 326 IPR000541 GO:0000049|GO:0002098|GO:0034227
Vvi18g0146 356 PIRSF ATPase_YdaO 11 323 IPR035107 GO:0008033
Vvi18g0146 356 Gene3D HUPs 14 330 IPR014729 -
Vvi18g0146 356 FunFam Cytoplasmic tRNA 2-thiolation protein 1 16 331 - -
Vvi18g0146 356 Pfam PP-loop family 64 251 IPR011063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0146 K14168 - vvi:100242135 726.087