Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0140 ATGGGTGAGGTAGTTGAAGAGAGTAATAATATTATTACTCTACTGAGAGTAGAGATGGAGTCGCCGGCGGCGGAGGAGCAGGAGCTGGTAGTGTCGGCGCCACCCATGCAGTTGCAGGATAATTCACCATATTTGTCGGGGAAACCACTGCTGTTAGTAGAACACCCAGATGTTACTACGAGAAGAGGAGGGACTCATTCTTTGACTCCCTTCTTCACACCATTGGGCAGCCCAATAAGAAGGGCTATACAGATGACCAAGTTTGATCCTCAGGATGCATGGCTTCCCATTACTGAATCCAGAAATGGAAACGCCTTCTACGCTGCCTTTCATACTCTTTGCTCCGGGATTGGGATTCAAGCCCTTGTCCTTCCTGTTTCCTTCACCATTCTTGGCTGGACATGGGGAGTAATATGCTTGACAATAGCATTTGTATGGCAGATGTATACACTGTGGTTGTTGGTGAAGCTGCATGACTCCCCTGAAACTGGGGTACGTTACAGCAGATACCTCCACATCTGCCAGGCTACTTTTGGCAACAAACTTGGGAAGCTGATGGCCCTCTTTCCAATAATGTACCTCTCCGGAGGCACATGCGTGGCGTTGATCATCGTGGGTGGCTCAACCCTGAAGCTTTTCTTCCAGATCATATGCGGCCACGGCTGCAATGCGAAGCCACTCACCACCCTGGAATGGTACTTGGTCTTTACATGCGCTGCTGTGCTTCTATCTCAGCTCCCCAACTTGAACTCCATCGCTGGGGTCTCATTGATTGGCGCTGCCACAGCCATTGCGTACTGTACAATAATGTGGCTCGTGGCTGTCACTGAGGGCAGGCTTGAAGGCGTGTCATACGACCCAGTGAGACCAGTTGAAAATGTGGCTTTGATTTTTGGGGTTCTGAACGCCCTTGGGATCATCGCTTTTGCTTTCAGGGGCCACAACCTTATACTTGAAATCCAGGCGACCATGCCTTCAAGTGAAAAGCGTACGACCTACGTGCCAATGTGGAGAGGGGTGAAAGTAGCGTATTTAATCATAGCATTGTGTTTATTTCCCCTTGCGATAGGAGGATACTGGGCTTATGGCCAAAAGATACCTGAAAATGGTGGCATGCTGACGGCAATTTACTTGTACCATGGGCGAGACACTTCCCAATTTGTTCTAGCACTGACAAGCTTACTAGTCATAATCAACTCTGTGAGCTCGTTCCAAATCTACGGTATGCCGATGTTCGACGACATGGAGTCCAAGTATACCAAGAGGAAAAACAAGCCATGCCCATGGTGGCTCCGGGCATTGTTCCGAACCATGTTCGGATACGGGTGCTTCTTTGTGGCTGTAGCCATGCCATTCTTGGGAAGCTTTGCAGGCCTCACAGGAGGCGTTGCAGTGCCAGTGACCTTTGCATATCCATGTTTCCTATGGCTGAAGATAAAGAAGCCCAAGAAGTACAGCATGATGTGGGTTCTGAACTGGGTTCTGGGAGCTTCAGGCATGGTGTTGAGTGTTGTACTGATAGCTGCTGGGGTTTATGTTGTGATTGATACTGGTATTAAGGTGAGCTTTTTCAAGCCCTACCCGGTGCAGCCCTCCGGACCTCCAGTGGTGTCGGTTCCTCCGTTTCAGCTCCATTCTCCGTCCATGACTCGGTCGCCGCTGATCGGTGGGGTCCCGAAAAGCCCATTAACTTCACGGATTCTGACTCCATTGGCGAGCCCCATGAAGAAGGCGATTGCAAGCATGCAAGGGTTCTTGGAAGAAGTTGGCCACCTCACCAAGCTTGACCCGCAAGATGCATGGCTTCCCATCACTGAGTCGAGAGATGGTAATGCGTACTACTCGGCGTTTCACTCGCTGAGTTCCGGGATTGGAGTCCAAGCCCTTGTGCTTCCCTTGGCTTTCACTACACTTGGCTGGATCTGGGGAATTCTTTGTCTGTCGCTGGCTTTTGGATGGCAGCTCTATACTCTATGGTTGTTGATCCAGTTGCACGAGTCGGCTTCCGGAACACGGTACAGCAGATACCTCCGACTTTCCATGGCTGCTTTTGGTGAAAAGCTGGGGAAGCTGCTGGCACTATTTCCAACCATGTATCTATCAGGAGGCACCTGCGTCACTCTCGTGATTATCGGTGGAGGGACCATGAAAATATTTTTCCAAATAGTCTGTGACTCCAACTGTAATGTGAACCCGCTGACAACCATAGAGTGGTACATCGTCTTCACCTGCTCCGCCGTCATCCTCGCTCAGCTTCCAAACTTGAACTCCATCGCCGGCATCTCACTCATCGGTTCAATCTCGGCCGTCACCTATTGCACTGTGATATGGGTGGTGTCCGTTACCAAAGACAGGCCACATGGCGTGTCTTATGACCCAGTGAAGCCCACATCGGATGTGGCTAGGCTCTGCGGCATCCTGAATGCGCTTGGGATAATCGCATTTGCCTTCAGAGGCCACAACCTTGTGCTCGAAATACAGGGGACGATGCCATCAAGCGCAAAGCATCCGTCACGGAAGCCAATGTGGAGTGGCGTCAAGTTCGCTTATTTAATCATAGCGATGAGCTTGTTTCCACTTGCAGTAGGAGGCTATTGGGCTTATGGAAACTTGATAAAAGAAGATGGGATGTTCGCGGCATTGTACAACTACCATGGACACGACACATCAAGAATTATTCTGGGTTTAACAAGCCTGCTCATCGTGATCAACAGCCTGACCTCGTTCCAGATATATGCAATGCCAGCATTCGACAACCTGGAGTTTAGGTATATTAGCAGCAGAAACCAACCGTGCCCATGGTGGCTCCGCTCAGGGTTCCGGGCCTTCTTTGGATGCCTTGTTTTCTTCATAGCTGTGGCGCTTCCGTTCTTGCCAAGTTTGGCAGGACTGATCGGAGGGGTTGCATTACCAGTCACTTTCGCATATCCTTGTTTCATGTGGATACAGATTAAACAACCCCAGAAATATAGTGTAATCTGGTACCTTAATTGGGGACTGGGATGCATGGGGATGGTTTTAAGTGTCCTCTTGGTCACCGGAGCAGTATGGAGCATCGTGACCATGGGCATTGAAATCCACTTCTTCAAGCCCAAGTAG 3099 0.5005 MGEVVEESNNIITLLRVEMESPAAEEQELVVSAPPMQLQDNSPYLSGKPLLLVEHPDVTTRRGGTHSLTPFFTPLGSPIRRAIQMTKFDPQDAWLPITESRNGNAFYAAFHTLCSGIGIQALVLPVSFTILGWTWGVICLTIAFVWQMYTLWLLVKLHDSPETGVRYSRYLHICQATFGNKLGKLMALFPIMYLSGGTCVALIIVGGSTLKLFFQIICGHGCNAKPLTTLEWYLVFTCAAVLLSQLPNLNSIAGVSLIGAATAIAYCTIMWLVAVTEGRLEGVSYDPVRPVENVALIFGVLNALGIIAFAFRGHNLILEIQATMPSSEKRTTYVPMWRGVKVAYLIIALCLFPLAIGGYWAYGQKIPENGGMLTAIYLYHGRDTSQFVLALTSLLVIINSVSSFQIYGMPMFDDMESKYTKRKNKPCPWWLRALFRTMFGYGCFFVAVAMPFLGSFAGLTGGVAVPVTFAYPCFLWLKIKKPKKYSMMWVLNWVLGASGMVLSVVLIAAGVYVVIDTGIKVSFFKPYPVQPSGPPVVSVPPFQLHSPSMTRSPLIGGVPKSPLTSRILTPLASPMKKAIASMQGFLEEVGHLTKLDPQDAWLPITESRDGNAYYSAFHSLSSGIGVQALVLPLAFTTLGWIWGILCLSLAFGWQLYTLWLLIQLHESASGTRYSRYLRLSMAAFGEKLGKLLALFPTMYLSGGTCVTLVIIGGGTMKIFFQIVCDSNCNVNPLTTIEWYIVFTCSAVILAQLPNLNSIAGISLIGSISAVTYCTVIWVVSVTKDRPHGVSYDPVKPTSDVARLCGILNALGIIAFAFRGHNLVLEIQGTMPSSAKHPSRKPMWSGVKFAYLIIAMSLFPLAVGGYWAYGNLIKEDGMFAALYNYHGHDTSRIILGLTSLLIVINSLTSFQIYAMPAFDNLEFRYISSRNQPCPWWLRSGFRAFFGCLVFFIAVALPFLPSLAGLIGGVALPVTFAYPCFMWIQIKQPQKYSVIWYLNWGLGCMGMVLSVLLVTGAVWSIVTMGIEIHFFKPK* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0140 1032 PANTHER OS05G0424000 PROTEIN-RELATED 105 514 - -
Vvi18g0140 1032 Pfam Transmembrane amino acid transporter protein 610 1017 IPR013057 -
Vvi18g0140 1032 Pfam Transmembrane amino acid transporter protein 102 515 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0140 Vvi-Chr18 1270401 1280697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0140 71 526 Organic Solute Cotransporters AT1G47670 55.889 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0140 - - vvi:100266142 1068.53