Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0133 ATGGAGAAAACAGAGATGGTGAGGTCAAGGTTCAAAAGGGTATGCGTATTCTGTGGAAGCAGCACTGGGAAGAGAAACTGCTACAGAGACGCTGCTATTGAATTGGCTCAAGAACTGGTCTCGAGGAGGTTGGATCTTGTTTATGGCGGAGGAAGTGTTGGGTTAATGGGTTTGGTTTCTCAGGAAGTTCATCGTGGCGGTGGACATGTACTTGGAATCATCCCCAAAACTCTGATGTGCAAAGAGATAACTGGGGAAACAGTAGGAGAGGTTCGACCCGTAGCCGACATGCACCAAAGGAAAGCTGAGATGGCCCGCCATTCAGATTGTTTTATCGCCTTACCAGGTGGCTATGGAACACTGGAGGAGTTATTGGAAGTCATCACATGGGCCCAGCTTGGAATCCATGACAAGCCTGTGGGTTTGCTGAATGTGGATGGCTACTACAACTACCTCCTTACATTCATCGACAAAGCCGTGGATGATGGCTTCATCAAGCCCTCTCAGCGTCACATCATCGTCTCTGCTCCAAACGCAAGAGAACTCGTTCAGAAACTCGAGGAATACGTGCCTGTGCATGATGGGGTTGTGGCTAAAGCTCGGTGGGAGGCCGAACAACTGGAGCTCAATGCATCTTTGCAGATAGACATCGCTCGCTAG 660 0.4955 MEKTEMVRSRFKRVCVFCGSSTGKRNCYRDAAIELAQELVSRRLDLVYGGGSVGLMGLVSQEVHRGGGHVLGIIPKTLMCKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNARELVQKLEEYVPVHDGVVAKARWEAEQLELNASLQIDIAR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0133 219 FunFam CASP-like protein 2 188 - -
Vvi18g0133 219 PANTHER LOG FAMILY PROTEIN YJL055W 6 210 - -
Vvi18g0133 219 Pfam Possible lysine decarboxylase 56 186 IPR031100 -
Vvi18g0133 219 Gene3D - 1 188 - -
Vvi18g0133 219 SUPERFAMILY MCP/YpsA-like 10 189 - -
Vvi18g0133 219 NCBIfam Rossman fold protein, TIGR00730 family 12 189 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0133 Vvi-Chr18 1227403 1228728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0133 K22522 - vvi:100255687 436.417