Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0130 ATGGGGTGCGCCACGTCGAAACTCGACGACCTCCCGGCCGTCGCTCTCTGCCGTGACCGCTGCAACTTTCTCGAGGACGCCGTACAGCTGCGTTACGATCTGGCCGATGCACATGTGGCGTACATGCAGTCTCTCACCACCATTGGTGTCTCACTCCACCGTGTCTTCCATCATGTTGCGAACCACTCTGATTCTAAAACAAAAGATGACGCGGTAGCTGCTGCAACCGCCTGCGCCGGGGATTCTCTGGGGAATCGTTCTGGCTCGGACTCTTCGCATCTGCAGTTTCGTTCCGATAGTGAAGACGATAATGATGGCAGTTCGGAATCTCTGAAGAATAATTATGTTCTTGAGCACGAAACCCTAGGTTCAATAAATTATGAAAAGAATCACCCGGCCCAGTCTGTGGCGTATTATTCTTTTCCTGATTATGGCCCTAACTCGTATCAGTACTTCGATTCCTCGACTGCGTACAATGGCGAGATGATCACTGGTTTCTTTCACGCCCCGAGTCCGTCACCGTTGCCGGCGTCCGGTGGCGGCTACGGATCGGATTCGAAGCCCCCTCCGTCTCCGCCGCGCAACTCGGCTTGGGATTTCTTGAATCTTTTCGATGAGAGTTACAAATTGCAGCCTTACTCTCCTATGCTTGGCTCGGAGGGTGTGAGAGATGAGGGAAAGCAGGAAGTCGCGAAAGAAGAGCGGAAATTTGACGATGGTGCTGGTAATTGCTCGAAAGTTGCAGAAGAGGAGGGTCAGGGAAGAAACATTGGCCAAAGTGGGACGAGCGCGTCAAGGGAAGATGCTGTGGTGGAGTGCGCGGCTCATGCAATGGAGAAGAGGGAAAATGGAGATTCCGATAAAGAGCCAGTGGAGGAACGGAGCGATTCCGCTACAATCGCTCCTACTGGGACCCAAGGCGTCATGCGAAGTGTCTCTGAGGCTATGAGAGAAATACAGGTCCTGTTTGAGAGGGCTTCAGAATCAGGCGGTGGAGTTTCAAAGATGCTGGAAGCGGGAAAACTCAATTATCATCCAAAGAGTGGTGTCTATCAAGTTTCCTCCAAGATGCTTCATGTGATTACCCCATCATTGTTAGTGGTGTCCTCACAACCTTCAACTGAGAATATTGGTTCTATATATTTGGACTTGAATGAAGATATGGGTATGAGTTCGGGGAATCTTTCCTCTACTTTGAAGAAGCTTCACATGTGGGAGAAGAAACTCTATGATGAAGTCAAGGGTGAGGAAAAACTGCGCATTATGCATGAACGGAAGTGTAAGCAGCTGAAACTTTTTGATGAGAAGGGTGCTGATGCTCAAAAAGCTGAAACCACTCAAACTTTAGTCCAGAGTATATCTACTAAAATAAGAATTGCAATTGATGTTGTTGACAAGATATCAATCACGATAAATAAGTTGAGGGATGAAGAGTTATGGCCGCAGATCAATGAATTAATCCATGGGTTCAGTGGAATGTGGAAAGCTATGCTAGAATGTCTTAAGAGTCAATCTCAAGCAGTTTCAGAAGCCAATAGTTTAGATGCCATCATTTGCAATGGAAAGCTTAGCGATGATTATCTTGAAGCCCTAATAGAACTTAAATTGGAGCTTCAGAACTGGAATTTGAGGTTCACCAATTGGATTGATACCCAAAAAGGCTTTGTCAAAGGCTTGAATAGTTGGCTTTTGAGATGTCTTTTATATGAACCTGAAGAAACGCCTGATGGAGCAGAGCCTATCTCTCCTACTAGCGTTGGGGCACCCCCAGTATTTGTGATCTGTAACCAGTGGGCAGAAGCCATGGAAAGATTTTCAGCCGAGGAAGTGGTTGAAGCCATACAAGCCTTTTTCACGACTGTAAATCAGCTCTTGGAACTGCATAGTGTAGATCTGCAGCAGAGGATGATTGTAGACAAGGACATGGAGAGAAAAGTGAAGAACTTGGAGAAGAAGGAGCAAAAGATGCAGAAGGTGATGCAAGCTGGAGAGAAAAAGATGACTCTAGAGCCTGGGGAAAGTGGTTCCCTTTTACCTGGAGTGGCTGTAAAACACGCTCAGATGATCAATGTTGGTAGTTTACAGTCTGGTCTGCGGCAGATTTTTGAGGCCATGGAGAGGTTCACAGCCAACCTGATGCAATCTTATGAGGAGCTTCTTGTAAGCATTGAAGATGCAAAGTGTGCTCAAGAGAGAACCCATAAACATCATGGATTTTTGCCCAAGTGA 2229 0.4684 MGCATSKLDDLPAVALCRDRCNFLEDAVQLRYDLADAHVAYMQSLTTIGVSLHRVFHHVANHSDSKTKDDAVAAATACAGDSLGNRSGSDSSHLQFRSDSEDDNDGSSESLKNNYVLEHETLGSINYEKNHPAQSVAYYSFPDYGPNSYQYFDSSTAYNGEMITGFFHAPSPSPLPASGGGYGSDSKPPPSPPRNSAWDFLNLFDESYKLQPYSPMLGSEGVRDEGKQEVAKEERKFDDGAGNCSKVAEEEGQGRNIGQSGTSASREDAVVECAAHAMEKRENGDSDKEPVEERSDSATIAPTGTQGVMRSVSEAMREIQVLFERASESGGGVSKMLEAGKLNYHPKSGVYQVSSKMLHVITPSLLVVSSQPSTENIGSIYLDLNEDMGMSSGNLSSTLKKLHMWEKKLYDEVKGEEKLRIMHERKCKQLKLFDEKGADAQKAETTQTLVQSISTKIRIAIDVVDKISITINKLRDEELWPQINELIHGFSGMWKAMLECLKSQSQAVSEANSLDAIICNGKLSDDYLEALIELKLELQNWNLRFTNWIDTQKGFVKGLNSWLLRCLLYEPEETPDGAEPISPTSVGAPPVFVICNQWAEAMERFSAEEVVEAIQAFFTTVNQLLELHSVDLQQRMIVDKDMERKVKNLEKKEQKMQKVMQAGEKKMTLEPGESGSLLPGVAVKHAQMINVGSLQSGLRQIFEAMERFTANLMQSYEELLVSIEDAKCAQERTHKHHGFLPK* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0130 742 Pfam Protein of unknown function (DUF632) 313 622 IPR006867 -
Vvi18g0130 742 Coils Coil 639 666 - -
Vvi18g0130 742 MobiDBLite consensus disorder prediction 278 297 - -
Vvi18g0130 742 MobiDBLite consensus disorder prediction 222 245 - -
Vvi18g0130 742 PANTHER UNCHARACTERIZED 1 721 - -
Vvi18g0130 742 MobiDBLite consensus disorder prediction 215 268 - -
Vvi18g0130 742 MobiDBLite consensus disorder prediction 174 196 - -
Vvi18g0130 742 MobiDBLite consensus disorder prediction 84 110 - -
Vvi18g0130 742 MobiDBLite consensus disorder prediction 278 295 - -
Vvi18g0130 742 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0130 Vvi-Chr18 1193572 1199075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0130 310 625 Acyl Lipid Metabolism Gene Families AT2G27090 31.714 1.99e-47 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0130 - - vvi:100250689 1444.87