Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0126 ATGCAAGGAGGATCATCAGGCATTGGCTATGGTCTGAAATACCAGGCCAGATGCATCGCGGATGTCAAGGCAGATACAGATCACACCAGTTTCATCACAGGCACTCTCAGTCTAAAAGAAGAAAACGAGGTGCATTTGATCAGGCTGTCGTCAGGTGGAACGGAGCTCATATGCGAAGGCTTGTTTTCGCACCCAAACGAGATCTGGGACCTCGCTTCTTGTCCGTACGATCAACGCGTCTTCTCCACCGTCTTCTCTTCCGGTGAATCATATGGAGCAGCAGTCTGGCAGATTCCTGAACTTTATGGCCAGCTAAATTCTCCTCAATTGGAGCGAATTGCTGTTCTTGATGCACACGCTTGTAAGATAAAATGCATTCTCTGGTGGCCATCTGGAAGGCATGATAAGTTGGTCAGCATTGATGATGAAAATCTATTCTTGTGGAGCTTAGACTCTTCAAGGAAGGCTGCACAGGTAATATCAAAGGAGTCGGCTGGAATGCTGCATTACTTATCTGGGGGAGCTTGGGATCCACATGATGTGAATTCTGTTGCATCAACATGTGAATGGTCAATCCAATTTTGGGATCTGCGTACAATGAAGAAGACAAATTCAATTGAGCATGCCCATGTCCGCAATGTAGATTATGACACCAAGAAGAAGCACATACTTGTAACTGCAGAGGATGAATCTGGGATATGCATATGGGATCTTAGGATGCCAAAGGTTCCAATCAAAGAGCTTCCTGGACATACACACTGGACATGGACTGTGAAGTGCAATCCAGAATATGGACTGATTCTGAGTGCAGGAACAGATTCATCTGTCAACTTGTGGTTGGCTTCTATGTCTAGTAATGATGACTTGACATCTGAAAGCAGCCCAATTGAGTCACCAACTCGACAGGTAGATCCACTTCTCAATTCCTACAGTGACTATGAAGACAGTGTTTATGGCCTTGCTTGGAGTTCCCGTGAGCCATCAATTTTTGCATCATTGTCGTATGATGGAAGGGTTGTTGTGGAATCCGTGAAGCCCTACCTCTCCAAAAAATGA 1056 0.4536 MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSGGTELICEGLFSHPNEIWDLASCPYDQRVFSTVFSSGESYGAAVWQIPELYGQLNSPQLERIAVLDAHACKIKCILWWPSGRHDKLVSIDDENLFLWSLDSSRKAAQVISKESAGMLHYLSGGAWDPHDVNSVASTCEWSIQFWDLRTMKKTNSIEHAHVRNVDYDTKKKHILVTAEDESGICIWDLRMPKVPIKELPGHTHWTWTVKCNPEYGLILSAGTDSSVNLWLASMSSNDDLTSESSPIESPTRQVDPLLNSYSDYEDSVYGLAWSSREPSIFASLSYDGRVVVESVKPYLSKK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0126 351 SMART WD40_4 303 343 IPR001680 GO:0005515
Vvi18g0126 351 SMART WD40_4 199 237 IPR001680 GO:0005515
Vvi18g0126 351 SMART WD40_4 161 196 IPR001680 GO:0005515
Vvi18g0126 351 SMART WD40_4 109 149 IPR001680 GO:0005515
Vvi18g0126 351 SMART WD40_4 241 280 IPR001680 GO:0005515
Vvi18g0126 351 SMART WD40_4 55 97 IPR001680 GO:0005515
Vvi18g0126 351 SUPERFAMILY WD40 repeat-like 19 341 IPR036322 GO:0005515
Vvi18g0126 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 279 IPR001680 GO:0005515
Vvi18g0126 351 PANTHER WD-REPEAT PROTEIN 1 350 IPR040323 -
Vvi18g0126 351 Gene3D - 14 349 IPR015943 GO:0005515
Vvi18g0126 351 FunFam WD repeat-containing protein DWA2 14 347 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0126 K23289 - vvi:100257408 728.398