Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0124 ATGGTTTTGCCCAGGCGGCGACACCACAGCAATAACCGCCTCCGCTGTTTGGCTCCGATTATCGTCGTCGTCTGCGGCGGTATCCTCCTCTTCTTAGCTCTCCTCTCCTTCCTCGTTCCTCCTCCCCTAGACACCGATCACCTCCGCTCCCGCCACAACTACTTTGTCCCGTTCGGCAGTCGCGGCGAGGGTTCGAATGGAGCCGTGAAGTTTAGTGTTCCGAGTGGCGGTGGAAGATCGGATCATGACCTGTGGAGTTCGAGATTTTCGAAATTCTACTATGGATGCAGCAACGCGAGCCATAAGTTTGGAAAAGCTGTAGCTATCACAGTTCCCAATCGATTCTTGATGATTGCTACCAGTGGAGGCTTAAATCAACAGAGAACTGGGATAACTGATGCTGTTGTCGCTGCCCGCATTTTAAATGCTACTCTTGTCGTTCCAAAACTGGATCAGAAGTCCTTTTGGAGGGATGCTAGTAATTTCTCAGAGATCTTTGATGTTGATTGGTTTATTAAGTATCTATCAAAGGATGTTAAAATCATAAAACAGCTTCCTGAAAAGAAAGGGAAAACTGGGACTCCTTATACTATGCGTGTTCCAAGGAAGTGTAGTGAAAGATGCTATCAAAGTCGTGTACTACCTGTTATTTTGAAAAGGCATATTGTTCGGCTCACCAAGTTTGATTATAGACTTGCGAATAAGTTGGACACAGATCTACAGAAGCTAAGATGTAGAGTGAACTACCATGCTTTAAGGTTCACTGTTCCTATACTTGACATGGGCCGAGAATTGGTCCACCGAATGAGGATAAGAAGCAAGCATTATATTGCCCTGCACCTGAGGTTTGAACCCGATATGCTTGCATTCTCAGGATGCTACTATGGTGGGGGAGAAAAGGAAAGGAAAGAGCTGGGTGCAATACGAAAGAGGTGGAAAACTTTACATACGAGCAACCCAGACAAGGAAAGGAGGCATGGAAAATGCCCACTCACTCCAGAAGAAGTTGGTCTAATGCTGAGAGCACTGGGATATGGCAGTGATGTTCATATTTACGTGGCATCTGGTGAAGTATACGGAGGGGAAGAGACATTGGCACCTCTAAAGGCACTCTTCCCAAATTTCTATTCAAAAGACACTATAGGCCGGAAAGAGGAACTGCAACCATTTGCTGCATTTTCTGCTCGCATGGCTGCACTTGACTTCATAGTTTGTGATGAAAGTGATGTATTTGTTACCAACAACAATGGAAACATGGCTAAAATATTAGCTGGGCGAAGGAGATATTTTGGACACAAGCCTACCATTCGTCCAAATGCCAAAAAACTATCTCGGTTGTTCCTGAATAAAGGTAACACGAGTTGGGAAGTGTTTGCCTCTAGAGTCCGTATTTATCAGAGAGGCTTCATGGGGGAGCCGAATGAGGTGAGGCCAGGCAGAGGCGAGTTTCATGAGAACCCATCCTCCTGCATATGTGAAGAGTCTGGGGCTAATGCAAAGAGAGATTCGGGTTCTCAAAAATCTGGGAAGGAGAGTAATGCCACAAGAAAAGATTTTGATGAAGATGATCAGAATATGGATGATGAGCTAGAATGGATGGATCCAGATGATGAAGAGGATCAAACTGGCCCTCAGGAGACTGGCCTAGCAAATGGAACAGGCTTGGATTATGGTGTACTCGCATCTGAGGAGCCTGAGTTGGAAGAGATGCTTTCAGACTAA 1722 0.4564 MVLPRRRHHSNNRLRCLAPIIVVVCGGILLFLALLSFLVPPPLDTDHLRSRHNYFVPFGSRGEGSNGAVKFSVPSGGGRSDHDLWSSRFSKFYYGCSNASHKFGKAVAITVPNRFLMIATSGGLNQQRTGITDAVVAARILNATLVVPKLDQKSFWRDASNFSEIFDVDWFIKYLSKDVKIIKQLPEKKGKTGTPYTMRVPRKCSERCYQSRVLPVILKRHIVRLTKFDYRLANKLDTDLQKLRCRVNYHALRFTVPILDMGRELVHRMRIRSKHYIALHLRFEPDMLAFSGCYYGGGEKERKELGAIRKRWKTLHTSNPDKERRHGKCPLTPEEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKDTIGRKEELQPFAAFSARMAALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLSRLFLNKGNTSWEVFASRVRIYQRGFMGEPNEVRPGRGEFHENPSSCICEESGANAKRDSGSQKSGKESNATRKDFDEDDQNMDDELEWMDPDDEEDQTGPQETGLANGTGLDYGVLASEEPELEEMLSD* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0124 573 CDD O-FucT_plant 115 435 IPR024709 -
Vvi18g0124 573 MobiDBLite consensus disorder prediction 494 573 - -
Vvi18g0124 573 PIRSF UCP009360 3 500 IPR024709 -
Vvi18g0124 573 MobiDBLite consensus disorder prediction 522 543 - -
Vvi18g0124 573 Pfam GDP-fucose protein O-fucosyltransferase 115 429 IPR019378 -
Vvi18g0124 573 MobiDBLite consensus disorder prediction 504 521 - -
Vvi18g0124 573 PANTHER O-FUCOSYLTRANSFERASE 16 12 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0124 Vvi-Chr18 1137027 1143920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0124 115 500 Miscellaneous Gene Families AT1G22460 43.842 1.34e-97 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0124 - - vvi:100267646 1157.51