Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0120 ATGGAGGAGCAGCATAAGAATGGCGGGAACAAGTATAGCATAATAGTCCCAACCTACAACGAGCGTCTGAACATCGCTCTTATCGTCTTCCTCATCTTCAAGCATCTCCGGGATGTCGACTTTGAAATAATTATTGTTGATGATGGGAGTCCAGATGGGACTCAAGAAATTGTGAAACAACTGCAGCAAGTGTATGGTGAAGACCGCATTCTATTAAGAGCAAGACCTAAGAAGCTTGGATTAGGGACGGCCTACTCTCACGGCTTGAAGCATGCATCTGGAAACTTTGTTGTAATCATGGATGCTGATCTATCACACCATCCAAAATATTTGCCAAGCTTTATCAAGAAACAGTTGGAAACTGGTGCAAGTATAGTAACTGGGACGCGTTATGTTAAAGGTGGGGGTGTGCATGGATGGAATCTTATGCGCAAACTAACCAGTAGGGGGGCCAATGTTCTTGCGCAAACACTTCTATGGCCTGGCGTATCAGACTTGACTGGATCTTTCCGGCTTTATAAGAAATCTGTGCTTGAAGAAGTCATCAGCTCATGTGTCAGTAAGGGATATGTCTTCCAAATGGAAATCATTGTTCGGGCTTCCAGAAAAGGCTACCATATTGAAGAGGTTCCAATTACTTTTGTTGATAGATTATTTGGAAGTTCAAAGCTTGGAGGATCTGAAATCGTGGGATATTTGAAAGGCCTTGCATATCTTTTGGTCACAACATAA 732 0.4276 MEEQHKNGGNKYSIIVPTYNERLNIALIVFLIFKHLRDVDFEIIIVDDGSPDGTQEIVKQLQQVYGEDRILLRARPKKLGLGTAYSHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEEVISSCVSKGYVFQMEIIVRASRKGYHIEEVPITFVDRLFGSSKLGGSEIVGYLKGLAYLLVTT* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0120 243 CDD DPM1_like 14 239 IPR039528 GO:0004582
Vvi18g0120 243 SUPERFAMILY Nucleotide-diphospho-sugar transferases 11 226 IPR029044 -
Vvi18g0120 243 Pfam Glycosyl transferase family 2 13 181 IPR001173 -
Vvi18g0120 243 FunFam Dolichol-phosphate mannosyltransferase subunit 1 2 234 - -
Vvi18g0120 243 PANTHER DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1 7 243 IPR039528 GO:0004582
Vvi18g0120 243 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 228 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0120 Vvi-Chr18 1095853 1099309 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0120 K00721 - vvi:100242020 484.567