Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0111 ATGGAGAAGCGAATTGCCATTGTTGGTGCTGGAATCAGTGGCTTACTTGCATGCAAATATGCAATGGAGAAGGGCTTCAATCCCATTGTCTTTGAGGCCAGGAGCAGCATAGGAGGGGTTTGGTCTCAAACAATTGAATCCACCAAGCTACAAACTCCAATATCCTACTACCGTTTTTCGGATTTTGCATGGGCGTCGTCTGTGACTGAGACTTTCCCTAACCACAACCAAGTGATGGAGTATCTTAAATCCTATGCCCTTCACTTCAACATCCTCCCTCAGATAAGATTCAGCTCCAGAGTCATCAGTATAGACTATTTCACACCCCGCAGTGAAGATTTTCCTTCTTGGGATCTCTGGGGTGGCACTGGTAAGCCCTTCTCACCTACTGGAAAATGGAACATCACTGTGAAGGTCACCAGGCATCCACTGATGGTGTACGAAGTGGATTTTGTTATTCTTTGCATTGGAAAGTACAGTGATCTACCAAACATTCCTGATTTTCCAATCAACAGAGGGCCAGATATCTTTGATGGGAAGGTCATACACTCCATGGATTATGCTGCCATGGGTGGTGATCTAGCCTCTGAATTCATCAAAGAAAAACGAGTCACTGTTGTTGGGCTTCAGAAATCTGCAGTGGATGTTGCTGCAGAAGTGGCTACAAGAAATGGGGAAGGACACCCCTGCACTTTGCTATTTAGGAGGGTCCACTGGCTGGTTCCTGAGCACTTTAATACAGTATCCTTTCAAAACCTCAATCGCTTCTCTGAGTTGATGGTCCATAGACCCAGTGAAGGATTTTTCCTCTGGCTCTTAGCATTTCTGCTTTCCCCTTTGTTCTGGATGTTTACAAAATTGGTGGAGATATATCTCAAATGGACATACCCTTTGAAGAAATACAACATGGTCCCAGAACATCCCTTCCTCAAACAGATAGTTTCGTGTATGTCCATGGTTATCCCGGCTAATTTCTACGACAGAGTAAGAGAAGGAAGCCTCATCCTAAAGAAAGCACAGAGCTTCAGCTTCTGCAGAAATGGATTGGTTCTAGATGGCGAGGCTGCAGTACTAGAAACAGACATTGTCATCTTTGCAACTGGATACAAAAGTGATGAAAAGCTCAGCAACATTTTCACTTCAACTTTCTTCAAAAATTGCATTACTGGATCCTCAGCTCCTTTCTACAGGGAGTGCATTCATCCAAGGATTCCCCAACTAGCAATACTTGGATACTCAGAAAGCCCGTCTGTCTTATACACCATGGAAGTGAAAAGCATGTGGTTGGCACATTTTTTAGCTGGGAATTTCAAGTTACCACCCGTAAAGGAGATGGAAGACGATGTAATGAAATGGGAAAAATGCAATGAGCGATATGCTGGTGATGGCTACAAGCGATCCTGTGTCAGTGTGTTGCTACAAATACATGTAAATGATCAGCTGTGCAGGGATATGGGATGCAACCCCAGAAGGAAGAGATGGTTTCTGCCTGAGATGTTTGCTGCTTATGGTCCTACGGATTATGCAAATTTAACTTGGCCTGGTTAG 1548 0.4412 MEKRIAIVGAGISGLLACKYAMEKGFNPIVFEARSSIGGVWSQTIESTKLQTPISYYRFSDFAWASSVTETFPNHNQVMEYLKSYALHFNILPQIRFSSRVISIDYFTPRSEDFPSWDLWGGTGKPFSPTGKWNITVKVTRHPLMVYEVDFVILCIGKYSDLPNIPDFPINRGPDIFDGKVIHSMDYAAMGGDLASEFIKEKRVTVVGLQKSAVDVAAEVATRNGEGHPCTLLFRRVHWLVPEHFNTVSFQNLNRFSELMVHRPSEGFFLWLLAFLLSPLFWMFTKLVEIYLKWTYPLKKYNMVPEHPFLKQIVSCMSMVIPANFYDRVREGSLILKKAQSFSFCRNGLVLDGEAAVLETDIVIFATGYKSDEKLSNIFTSTFFKNCITGSSAPFYRECIHPRIPQLAILGYSESPSVLYTMEVKSMWLAHFLAGNFKLPPVKEMEDDVMKWEKCNERYAGDGYKRSCVSVLLQIHVNDQLCRDMGCNPRRKRWFLPEMFAAYGPTDYANLTWPG* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0111 515 Gene3D - 335 498 IPR036188 -
Vvi18g0111 515 FunFam Flavin-containing monooxygenase 1 173 - -
Vvi18g0111 515 PIRSF FMO 1 503 IPR000960 GO:0050660|GO:0050661
Vvi18g0111 515 SUPERFAMILY FAD/NAD(P)-binding domain 351 514 IPR036188 -
Vvi18g0111 515 SUPERFAMILY FAD/NAD(P)-binding domain 1 271 IPR036188 -
Vvi18g0111 515 FunFam Flavin-containing monooxygenase 327 498 - -
Vvi18g0111 515 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vvi18g0111 515 Gene3D - 2 268 IPR036188 -
Vvi18g0111 515 Pfam Flavin-binding monooxygenase-like 3 461 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi18g0111 515 PANTHER DIMETHYLANILINE MONOOXYGENASE 3 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0111 Vvi-Chr18 990457 992640 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0111 K00485 - vvi:100241061 1042.72