Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0109 ATGGGTTGTCTCCTTTCTCTCTCAAATCCGTTGCGACAGTTCTTTTTTCCGCTGGTGTTCTTTGTTTTTTTCTCACCTGTTAATGGCAAGGATAATCTGACTCCACCTTCCTTTACGCCCATCAATGGCGATCTTTACCATTCCAGTGGGCTTTTGATGGAAGAGATAAGCAACTTGGTCCATCGGCACCCAGATAAATTCACTATGGAAACAATTGAAACTGGAAATCAAGGCTACAAAGCGGAGGTCACAGTAGTTACTTATTGCCGAAACAGGAAAGAGATTGATGACAGGTCAAAGTTTCGGATCCTTCTTAGTTTTGGGCAGCATGGGAGGGAGCTCATTACATCTGAACTTGCATTGCGGGTCCTATCAGTGTTGAGTGAAGAACAGTTTCTACCCAACATGGATCCGATTTCTTTAAACAGCACACTCGATAAGCTTGTCATAAAGGTGGTGCCAATGGAAAATTTGAATGGACGCAAACTTGTTGAAGCAGGAGAACTCTGTGAGAGGAGAAATGGGAGAGGTGTTGATCTCAATCGGAATTGGAGTGTAGACTGGGGCAAAAAGGAGAAGGATTATGATCCATATGAAGAAAATCCTGGAACTGCTCCTTTTAGTGAGCCTGAGACTCAAATAATGCGGAAACTCTCCATATCATTTGATCCACATATATGGGTTAATGTGCACTCTGGAATGGAGGCTCTATTCATGCCATATGACCACAGAAACACAACCCCTGATGGATTGCCTTCACAACAGATGAGGCGGTTGCTTGAAGAACTGAACCATCTTCACTGCCAAGACCGTTGCATGATTGGATCAGGAGGAGGCTCTGTCGGGTATCTGGCTCATGGGACAGCGACAGATTACATGTATGATGTTGTAAGGGTGCCCATGGCTTTCACCTTCGAGATTTATGGAGATGGAACAGCGTCTTCGAAGGACTGCTTCAAAATGTTTAACCCCATTGACCTCACCACCTTCAATAGAGTTCTCAATGACTGGTCTGCTGCATTCTTTACTATCTTCAAGATGGGGCCGCAGCAGCTGCAGAAAAAGCATTCAAAACCTTCAACGACCAATTCTGAGAAGTGGGTGTCCATAGATGAGTACCTTGACGGGTATTTAATGGAAAGGAGAAACAGATATGGGAAGAAGGTGGAGGTTCTGGAGTTTGGAATGCAGGAGATAAGAACATATTTCAGGCTGTTCATGTTATCATCAATTCTGTTGCTGTTCATGTTCTGTTCCAGAATTTCAAAGAGCAAGTGCAGTAGGCCAATTGTTGCTGTCATGCCCATCTGA 1311 0.4416 MGCLLSLSNPLRQFFFPLVFFVFFSPVNGKDNLTPPSFTPINGDLYHSSGLLMEEISNLVHRHPDKFTMETIETGNQGYKAEVTVVTYCRNRKEIDDRSKFRILLSFGQHGRELITSELALRVLSVLSEEQFLPNMDPISLNSTLDKLVIKVVPMENLNGRKLVEAGELCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGTAPFSEPETQIMRKLSISFDPHIWVNVHSGMEALFMPYDHRNTTPDGLPSQQMRRLLEELNHLHCQDRCMIGSGGGSVGYLAHGTATDYMYDVVRVPMAFTFEIYGDGTASSKDCFKMFNPIDLTTFNRVLNDWSAAFFTIFKMGPQQLQKKHSKPSTTNSEKWVSIDEYLDGYLMERRNRYGKKVEVLEFGMQEIRTYFRLFMLSSILLLFMFCSRISKSKCSRPIVAVMPI* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0109 436 CDD M14-CPA-like 100 322 IPR034269 -
Vvi18g0109 436 SUPERFAMILY Zn-dependent exopeptidases 43 340 - -
Vvi18g0109 436 Pfam Zinc carboxypeptidase 56 326 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g0109 436 PANTHER PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B 44 347 - -
Vvi18g0109 436 Gene3D Zn peptidases 44 329 - -
Vvi18g0109 436 SMART zn_carb 46 328 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vvi18g0109 436 FunFam Carboxypeptidase A6 42 337 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0109 - - vvi:100242797 874.004