Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0104 ATGATTGAGAAGAAGCAGAAGAAGTTTCTTACTGTGGCACCATTTGAGTGTGCCTGGCGCAAGGACCTGAGGTTTCGGGAAGCTGGGCGAGGCTGTGTGGCATTCGAAGCTTTTGCTCACAATGATGTCACGTTGGTTTTTCGGGAGAGTGTGGGAAGTCAGCACTACCATTATAAAAGGGATAACAGTCCACACTATACGGTAATTCTTGGTAGTCATCGGAATCGGAGATTGAAAATTGAGGTGGATGGGAAGACTGTGGTTGATGTGGCAGGGATCGGGCTTTGTTGTTCTTCGGCATTTCAGAGCTATTGGATCAGTATCTATGATGGTTTGATTAGTATTGGCAAAGGAAGATACCCTTTTCAGAATCTTGTGTTTCAGTGGCTTGATTCCAACCCCAATTGTAGTGTTCAGTATGTTGGCCTAAGTAGTTGGGATAAACATGTGGGTTATAGAAATGTCAATGTATTGCCATTAACCCATAACCATATATCCCTGTGGCAGCACGTGGATTATGGTGAATATGAAGGAGGGGAGGATGGTGAAGAGGATTTGGAGGATGAGTATGTGAGCTATGAAAAATGGGGACTCGAAAATTTTCTTGAGAGTTGGGAACTATCTGATATGTTCTTCATTGTTGGTTTGGAGGAAAGGGCTGTACCGGCTCACAAGGTTATCTTGGGGGCATCTGGTAATTTTTCTTTCACTTCAGCAGATGAAGAGGTTGTCCAGCTCCCAGGGGTAACCTACCCAGTTCTTCATGCATTCCTTCAATATATCTATACGGGCCAGACCCAGATTCCAGAGTCACAACTTGTATCCCTGAGGGCTCTGAGCTTACAATTTGAAGTGATGCCATTGCTGAAGCAGTGTGAAGAGATTATTGAACGTTTTAAACTGAATAAGAAATTATTTGACTCGGGTAAGAATGTTGAGATATCATATCCAAATGCTTGGCCCCATTGCTGTACATCTTTCCCATCTGGACTCCCTGTGAATATGCCGAGGCTCAAAAAATTGCATTTTACTGGAAAGTACTGTGATGTGGACATCTACATTGAGGGTCATGGTCTTGTTGCACAGCCACATAGAATTATCCTTGGTTTATGGAGTGCTCCATTTGCAAAGATGTTCACAAATGGAATGAGTGAGAGCATTTCCTCAAAGGTTTGCCTAAGGGATGTGTCGCCACAAGCATTCAATGCTATGCTTGAATTCATGTATAGTGGCAAACTCGATATAGATGATACCATGGACACGGGGACTTTGTTACTCCAGCTTCTTCTATTGGCAGATCAATTTGGTGTTGCTCTCTTGCATCAGGAATGCTGCAAAACTCTTTTAGAATGCCTATCAGAGGACTCAGTATGTCCAATTCTCCAAGTGGTTTCATCAGTTCTGTCATGTAAACTTATTGAAGAAACATGCCTGAGGAAATTTTCAACACACTTCGATTATTACACAACTGCAAGCATTGACTTCATCTTGTTAGATCAGACAACTTTTTGCAGTATTATTCAGCATCCAGATCTGACTGTAACGTCTGAGGAAAGAGTTCTCAATGCAATCTTATTGTGGTGTATGCAAGCAAAGGAATTGCATGGGTGGGAGGTAGTGGATGAACTCATAACATATTCAACTCCTGAACTCCTTTTCAGAGAGAGGCTTCACTCAGTCATTGATTTGTTGCCATTCATACGGTTTCCATTACTGCCATATCCCTTGCTCAAGAAGTTGGAGAAGAGCAGCCTTAGCAGACAGATTCCGGTTTTTGATGATCTTGTAAAGGAGGCAATCAATTATGTAGAATTTGGATTGGCAAGGCCAGAAAATGACCAGTATGCAAGATTTCAACATAGGCGATCTAGCTTTAAGGAGCTCCAGTACATATGTGATGGGGACAGCAATGGAGTTCTGCACTTTGCAGGCACATCATATGGGGAACATCAGTGGGTAAATCCCATTCTAGCCAAGAGGATTACTATTACTGCAAGCAGTCCAACTTCGAGACATACTGACCCAAAGGTTCTAGTCTCAAGGACTTATCAGGGAACATCTTTCACTGGGCCTCGAGTTGAAGATGGGAAGAACTGTTCATGGTGGATGGTTGACATTGGCGAAGATCACCAGCTTATGTGCAACTATTACACCTTGAGACAGGATGGATCGAGAGCCTATATTAGATTTTGGAATCTTCAGGGGTCGTTGGATGGGAAAGCTTGGACAAACTTGAGAGTACATGAGAATGATCAGACAATGTGCAAGCCCGGTCAGTATGCATCATGGCCTATAATGGCACCGAATGCTCTACTTCCCTTCAGATTCTTTAGGGTTATTCTGACAGGTCCCACCTCTGATGCTTCTAACCCCTGGAACTTCTGCATTTGCTTCCTGGAACTGTACGGCTACTTCCACTAA 2421 0.4321 MIEKKQKKFLTVAPFECAWRKDLRFREAGRGCVAFEAFAHNDVTLVFRESVGSQHYHYKRDNSPHYTVILGSHRNRRLKIEVDGKTVVDVAGIGLCCSSAFQSYWISIYDGLISIGKGRYPFQNLVFQWLDSNPNCSVQYVGLSSWDKHVGYRNVNVLPLTHNHISLWQHVDYGEYEGGEDGEEDLEDEYVSYEKWGLENFLESWELSDMFFIVGLEERAVPAHKVILGASGNFSFTSADEEVVQLPGVTYPVLHAFLQYIYTGQTQIPESQLVSLRALSLQFEVMPLLKQCEEIIERFKLNKKLFDSGKNVEISYPNAWPHCCTSFPSGLPVNMPRLKKLHFTGKYCDVDIYIEGHGLVAQPHRIILGLWSAPFAKMFTNGMSESISSKVCLRDVSPQAFNAMLEFMYSGKLDIDDTMDTGTLLLQLLLLADQFGVALLHQECCKTLLECLSEDSVCPILQVVSSVLSCKLIEETCLRKFSTHFDYYTTASIDFILLDQTTFCSIIQHPDLTVTSEERVLNAILLWCMQAKELHGWEVVDELITYSTPELLFRERLHSVIDLLPFIRFPLLPYPLLKKLEKSSLSRQIPVFDDLVKEAINYVEFGLARPENDQYARFQHRRSSFKELQYICDGDSNGVLHFAGTSYGEHQWVNPILAKRITITASSPTSRHTDPKVLVSRTYQGTSFTGPRVEDGKNCSWWMVDIGEDHQLMCNYYTLRQDGSRAYIRFWNLQGSLDGKAWTNLRVHENDQTMCKPGQYASWPIMAPNALLPFRFFRVILTGPTSDASNPWNFCICFLELYGYFH* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0104 806 Gene3D Potassium Channel Kv1.1; Chain A 336 486 IPR011333 -
Vvi18g0104 806 Gene3D Potassium Channel Kv1.1; Chain A 196 312 IPR011333 -
Vvi18g0104 806 CDD BTB_POZ_ZBTB_KLHL-like 207 283 - -
Vvi18g0104 806 ProSiteProfiles BTB domain profile. 208 270 IPR000210 GO:0005515
Vvi18g0104 806 Pfam F5/8 type C domain 662 786 IPR000421 -
Vvi18g0104 806 PANTHER OS05G0345500 PROTEIN 1 806 - -
Vvi18g0104 806 Gene3D - 656 804 - -
Vvi18g0104 806 Pfam BTB And C-terminal Kelch 464 533 IPR011705 -
Vvi18g0104 806 SMART BTB_4 348 452 IPR000210 GO:0005515
Vvi18g0104 806 SMART BTB_4 208 300 IPR000210 GO:0005515
Vvi18g0104 806 SMART BACK_2 458 581 IPR011705 -
Vvi18g0104 806 Pfam BTB/POZ domain 199 298 IPR000210 GO:0005515
Vvi18g0104 806 Pfam BTB/POZ domain 340 450 IPR000210 GO:0005515
Vvi18g0104 806 Pfam Farnesoic acid 0-methyl transferase 53 150 IPR022041 -
Vvi18g0104 806 CDD BTB_POZ_ZBTB_KLHL-like 347 419 - -
Vvi18g0104 806 SUPERFAMILY POZ domain 197 296 IPR011333 -
Vvi18g0104 806 Gene3D - 487 603 - -
Vvi18g0104 806 SUPERFAMILY Galactose-binding domain-like 649 805 IPR008979 -
Vvi18g0104 806 ProSiteProfiles BTB domain profile. 348 417 IPR000210 GO:0005515
Vvi18g0104 806 SUPERFAMILY POZ domain 330 449 IPR011333 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0104 - - vvi:100249666 1601.26