Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0094 ATGGCCTTCAGATTTCGTATCGACCTTTGCTTCGCCTTCGTTTCGATCCTTGTTCTTGCTGAATGCTATTTGCATCTGTATCGTAACGTGAGAGACTCCGGCGAGGATCTCCTGCAGCGCAGACTTAGTCTCAGGGCTCGTTGGGACGAAATGTGTCGGCCCCATTACGCAGTGAGGGAAGAACTTGTTCGCCCCAGCCGCCATGTGTCGTCCCTTAGAGACTCGATCACTCCCACCACAGAGTCCGTCCTCTTCCCTGACTGGGAGGTTCTCATTATTGTTTCTCCGGAGGGTGAGGTATCGTCGGAGTCTGGCGAGGATTATCAATGCGTTTTCCATAACAACGCGACGTCTCCGGCGAGACCCGCTTGGGTTTTTCCGTTCACGAAGAGGAGGACGTTCAAGTGCGTCATTCCGAGGAGAATCCGCCGCTTCCGCCCGTACTTTCAGCCCGCGCTGACGAGGGCGGCGCCGGCGAAGCAGAGGGAGATTCATTCATTTACGCGGGAGCTCTTCCGGTGGACTTTTCTTGCTTACGAGTCTTTATCCACCCAAAACGACGTCGTTCTCTTCGTGAAGGGCGTGAACAATCGCCAAGGAGTCAACCGATCACCGTCGCAACTCAGATGCGTGTTCGGCAACGACGCCACAATTGCCGTCAGAACCGCCGTCACCACCTCCTCCCAAGAGGTGTTCCGCTGCCGCCACCCTGACTTAAGGGCGTTATCTCACGGAGAAATCGAAAACGAAAGAATCAAAATCTCCCTAGAAATTTCTGACGAAAACCGGGTCGTCCCCTCCGTGGCGTACTACACCCCCATGCGCACAGTAGCCACCCTGGAGCCAAAATCCCAACTGTGCGCATCCACCATGATCTATAACGCAGCTAAGTTCTTGAAAGAGTGGGTGGTGTACCACTCCAGAATCGGAGTCGAAAAATTCATACTGTACGACAATGGCAGCGACGACGAGCTCCAGACAATCGTAGAAGAACTGAATCAAGATGGTTTCAACGTGAAAACGGTGCTGTGGCCATGGCCTAAAACCCAAGAAGCTGGGTTCTCGCATAGTGCAATCTACGCCAAAGACACCTGCAAATGGATGATGTACGTTGACGTCGATGAGTTTGTATTTTCTCCAACATGGCTCAATTCCTCAACCCCATCGACCAAAATGCTATTTTCTCTCTTGCCAAACAAACCCACTTCCAATGTGGGGCAAATTTTGATCCGTTGCAACGAGTTCGGGCCATCGAACCAGCACTCCCACCCCGTTCATGGAGTAACACAAGGATACACATGCCGGAGACGGGCTGAACAGCGGCACAAATCAGTGGTTTTGCTGGAAGCAGTTGATTCATCATTGGTTAATGCAGTTCACCATTTTGGGTTGAAGGAGGGTTTCAATGGGAAGAGGTTGAGCTTGAGTCAAGGGGTGGTGAATCACTACAAGTACCAGGCATGGAGTGAGTTTAAGGCCAAGTTTAGAAGAAGGGTGTCTGCTTATGTTGTGGATTGGACAGACGAAGCGAACCCAACGTCTAAGGATAGGGCACCAGGGTTAGGGTTCTTGCCCATTGAGCCTAAAGGGTGGGCCAGCAAGTTCTGTGAAATGAATGATGAGAGGTTGAAGATGGTGACTCAGAGATGGTTTGCGATCCCCTGGACGTCAGAGAACAAAATGGCTTGGGAGAAATGA 1698 0.5159 MAFRFRIDLCFAFVSILVLAECYLHLYRNVRDSGEDLLQRRLSLRARWDEMCRPHYAVREELVRPSRHVSSLRDSITPTTESVLFPDWEVLIIVSPEGEVSSESGEDYQCVFHNNATSPARPAWVFPFTKRRTFKCVIPRRIRRFRPYFQPALTRAAPAKQREIHSFTRELFRWTFLAYESLSTQNDVVLFVKGVNNRQGVNRSPSQLRCVFGNDATIAVRTAVTTSSQEVFRCRHPDLRALSHGEIENERIKISLEISDENRVVPSVAYYTPMRTVATLEPKSQLCASTMIYNAAKFLKEWVVYHSRIGVEKFILYDNGSDDELQTIVEELNQDGFNVKTVLWPWPKTQEAGFSHSAIYAKDTCKWMMYVDVDEFVFSPTWLNSSTPSTKMLFSLLPNKPTSNVGQILIRCNEFGPSNQHSHPVHGVTQGYTCRRRAEQRHKSVVLLEAVDSSLVNAVHHFGLKEGFNGKRLSLSQGVVNHYKYQAWSEFKAKFRRRVSAYVVDWTDEANPTSKDRAPGLGFLPIEPKGWASKFCEMNDERLKMVTQRWFAIPWTSENKMAWEK* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0094 565 Pfam Glycosyltransferase family 92 286 513 IPR008166 -
Vvi18g0094 565 SUPERFAMILY Nucleotide-diphospho-sugar transferases 292 384 IPR029044 -
Vvi18g0094 565 CDD Glyco_tranf_GTA_type 292 383 - -
Vvi18g0094 565 PANTHER UNCHARACTERIZED 82 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0094 Vvi-Chr18 827872 829569 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0094 - - vvi:100249660 1134.4