Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0091 ATGGAGCGTTTGTTCTCATCGTTGAGTATATGTACGGTGCCAGGGACCCGAATTTATTGGGATAAACGGTATGTGAAAGCACAATTCGTTGTGGAGTTTTCAAACAAGAACGAGATAAAGTTGGGGGTGCAATGTAATGCTAGGGTTAACCATAGAAAACCAACCAAGAACCTTCCGCATCCACGGCGCGCTAAGCTCCCTCCGGAGCCTGAAATTAGCACATTTTTGAAGGGGGGAAATAGCGGGACAGAGCAATCTGAAATGGGTACGGTTTTGGATAAAGAACCTGATGCGAATGATGATGGGTTTCTGGTTGATGGTATTGAAGGAAGAAAAGAGGGGGAGATAGTTTGGGATTCGGATGAGATTGAAGCAATTTCGTCTCTTTTTATGGGGAGAATCCCTCAAAAGCCTGGGAAATTGAATAGGGAAAGGCCTCTTCCACTCCCACTTCCCTACAAACTTCGACCTATGGGACTTCCCACAACGAAGAGACATGTGAGAGCTGCTTCTTCAATGCCATATGCTTCCCGGGCATCCCTATCTAAGCAAGTTTACAAGAACCCAGATTTCCTCATTAGCATAGCCAGAGAGATAAGAAAGCTTCCTTTGGAAGATGACGTTTCTCCAGTTCTTAACAAGTGGGTTAGGTTTCTGCGGAAGGGCTCATTGTCATTGACAATCCGGGAATTGGGTCACATGGGTCTTCCTGAGAGAGCTCTACAGACCTTCTTCTGGGCTCAGAAACAACCCCAGCTCTTCCCAGATGATCGCATTTTGGCCTCAACAGTTGAGGTCCTGGCAAGGACTCACAAGTTGAAAGTTCCATTCAGTTTGGAAAAGTTCACCGGTTTGGCTAGCCGGAGTGTAATTGAGGCACTGGCAAGGGGATTCATCAGAAGGGGAAGTTTGAGCCTTGCATGGAAGCTTCTCTTAGTTGCCAAGGATAGTAAAAGGATGTTGGGACCCAGCATTTATGCAAAGCTAATATTTGAGCTTGGAAAGAACCCCGATAAGCACAGCCTTGTACAGGCATTACTAGATGAGCTTGGAGAAAGAGAAGATTTGAAATTAAGCCATCAGGATTGCACAGCAGTCATGAAAGTCTGCATAAGGCTTGGGAAATTCGAAATAGTGGAAAGTCTTTTTAACTGGTATAAACAATCCGAGAATAGTCCAAGTGTGGTTATGTACACAACTCTAATTCATAGTCGCTATACTGAGAAGAAATACAGGGAGGCACTGGCTGTCGTTTGGGAAATGGAGGCTTCAGACTGTGTCTTTGATCTTCCAGCTTATCGTGTGGTGATAAAGCTTTTTATTGCTCTGAATGATCTATCAAGAACTGGAAGGTATTTTTCGAAACTTAAGGAAGCAGGTTTCTCTCCGACATATGATATATACCGGGACATGTTAAAGATTTACATGGTTTTCCGGAGGCTGGCAAAGTGTAGGGAGGTCTGCAAGGAGTTAGAGATGTCAGGGTTCAAGTTGGATAAGGGAACCTTGTCACAGTTGTTGCAACTTGAAAAAGAAAACAGGTAA 1545 0.444 MERLFSSLSICTVPGTRIYWDKRYVKAQFVVEFSNKNEIKLGVQCNARVNHRKPTKNLPHPRRAKLPPEPEISTFLKGGNSGTEQSEMGTVLDKEPDANDDGFLVDGIEGRKEGEIVWDSDEIEAISSLFMGRIPQKPGKLNRERPLPLPLPYKLRPMGLPTTKRHVRAASSMPYASRASLSKQVYKNPDFLISIAREIRKLPLEDDVSPVLNKWVRFLRKGSLSLTIRELGHMGLPERALQTFFWAQKQPQLFPDDRILASTVEVLARTHKLKVPFSLEKFTGLASRSVIEALARGFIRRGSLSLAWKLLLVAKDSKRMLGPSIYAKLIFELGKNPDKHSLVQALLDELGEREDLKLSHQDCTAVMKVCIRLGKFEIVESLFNWYKQSENSPSVVMYTTLIHSRYTEKKYREALAVVWEMEASDCVFDLPAYRVVIKLFIALNDLSRTGRYFSKLKEAGFSPTYDIYRDMLKIYMVFRRLAKCREVCKELEMSGFKLDKGTLSQLLQLEKENR* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0091 514 PANTHER YALI0C12947P 47 514 - -
Vvi18g0091 514 Pfam Pentatricopeptide repeat domain 352 402 IPR002885 -
Vvi18g0091 514 MobiDBLite consensus disorder prediction 51 87 - -
Vvi18g0091 514 Gene3D Tetratricopeptide repeat domain 338 514 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0091 294 467 Miscellaneous Gene Families AT4G11690 26.404 4.81e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0091 - - vvi:100266830 1013.45