Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0088 ATGGAAGCTGAAGGTCAGAGAAAGAAGGAGGCGATACCTCTCCTGACTCCGTACCAGATGGGAAAGTTCCATCTCTCTCACAGGATGGTATTGGCACCAATGTCGAGATGGAGATCTTACAACTTCACAGCTCAACCGCATGCCGTCTTGTATTACTCTCAGAGAACAACAAGGGGTGGCTTCTTGATCGGAGAAGCCTCAGGCATTTCCGATACAGCCCAAGGTTACCCAAATACACCTGGGATATGGAGGAAGGAACACGTGGAAGCATGGAAGCCCGTTGTGGATGCGGTTCATGAGAAAGGGGCCATCTTCTTTTGCCAACTTTGGCATGCTGGGAGAGCTTCCAAATATGAATATCAACCAAATGGGCACCCACCGATATCTTGTACAGATAAGCCAATTACAAGTGAGGCTCAAATTGATGGAACGACTGCCGCAGACCACCCTCCTCCTCGACGCCTTAGCGTACAAGAAATCTTTCAGGTTGTCGATGACTTTAGGGTTGCTGCCAGAAATGCCAGGGAAGCTGGTTTTGACGGAGTGGAGATTCATGCAGGCAACGGGTACCTAGTGGACCAGTTCTTGAAAGACGGGGTAAATGATAGAAGGGATGAGTATGGAGGTAGTTTAGAAAACCGATGCCGCTTCCCTCTCCAGGTTGTCGAAGCCATTGCTGATGAGATTGGAGCTGATAGAGTCGGCGTTAGACTCTCACCCTTTGCAGATAATAATGATTGTGGGGACTCGAACCCGCAAGCTCTAGCCATCTACATGGCTCAAGAATTGAGTAAGCGAGGAATCCTCTACTGCCACATAATGGAGCCAACGATGATCACTCAGTTTGAGAGGGTTGAAACCAAATCTAGCCACGGCCCCATGAGGGAAGCTTTCAAGGGTACGTTTATCGCGGCTGGGGGATACAATAGAGAGGATGGAAATGAGGCTATAGCAAATGGAAATGCCGATCTGATTGCATTTGGTCGCTTATTTCTGGCAAACCCCGATTTGCCTAAGCGGTTCGAGCTTGATACTCCGCTAAATAGGAGTGACGGGAGAACTTTTTGTACGTCAGATCCAATTGTTGGCTACACAGACTACCCCTTTCTTGATCAAACACCCTAA 1125 0.4853 MEAEGQRKKEAIPLLTPYQMGKFHLSHRMVLAPMSRWRSYNFTAQPHAVLYYSQRTTRGGFLIGEASGISDTAQGYPNTPGIWRKEHVEAWKPVVDAVHEKGAIFFCQLWHAGRASKYEYQPNGHPPISCTDKPITSEAQIDGTTAADHPPPRRLSVQEIFQVVDDFRVAARNAREAGFDGVEIHAGNGYLVDQFLKDGVNDRRDEYGGSLENRCRFPLQVVEAIADEIGADRVGVRLSPFADNNDCGDSNPQALAIYMAQELSKRGILYCHIMEPTMITQFERVETKSSHGPMREAFKGTFIAAGGYNREDGNEAIANGNADLIAFGRLFLANPDLPKRFELDTPLNRSDGRTFCTSDPIVGYTDYPFLDQTP* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0088 374 CDD OYE_like_FMN 13 351 - -
Vvi18g0088 374 SUPERFAMILY FMN-linked oxidoreductases 13 370 - -
Vvi18g0088 374 PANTHER NADH OXIDOREDUCTASE-RELATED 9 370 IPR045247 GO:0010181|GO:0016491
Vvi18g0088 374 Pfam NADH:flavin oxidoreductase / NADH oxidase family 14 347 IPR001155 GO:0010181|GO:0016491
Vvi18g0088 374 Gene3D Aldolase class I 2 373 IPR013785 -
Vvi18g0088 374 FunFam 12-oxophytodienoate reductase 3 7 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0088 Vvi-Chr18 792239 794919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0088 1 373 Acyl Lipid Metabolism Gene Families AT1G76690 64.879 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0088 K05894 - vvi:100256540 777.319