Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0078 ATGGCGGTGGCGATGGTGAGGATCGCGATGATATTCGCCATATTCTCAGTAGCTTTTTGCATTGATGATAAGTGCGCAGCTTGCAATGCCGTCGCGGAGGAGCTAGAGTTTGGACTTTCCAATGAAAAACCAAGGAATCATTTGGATATGAGACATCGCCTAGACTCTAAAGGTCAACGAAAAGGAAAGGTAATTGATTACAGAGTTAGTGAGCTGAGAGTTGTTGAGCTCCTGGATGGGCTGTGTGAAAAGATGCAAGATTACACTCTGGAGAAGATAGATTCAACCAGACGAGAATGGGTCAAAGTGGATGACTGGGATAACATAACAACTAATAAACAAGAAGCTCGAGCATATTCAAAAGATATATCATCTTATTGTGGAAGGTTACTAGAGGAAACAGAGGATGAGTTAGCAGACTTGATAAAGAAAGGATCCGTTAAAACAGGAGAAGTAAGCAAGGTTCTATGTCAAGATCTGAGCAAGCACTGCAGTGTGACAAGTTTCTCCTCCCATCAGGTGGTTGATCATGAAGATGATGATGATGCATCTGAAGAACTCTAA 564 0.422 MAVAMVRIAMIFAIFSVAFCIDDKCAACNAVAEELEFGLSNEKPRNHLDMRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTLEKIDSTRREWVKVDDWDNITTNKQEARAYSKDISSYCGRLLEETEDELADLIKKGSVKTGEVSKVLCQDLSKHCSVTSFSSHQVVDHEDDDDASEEL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0078 187 Pfam TLR4 regulator and MIR-interacting MSAP 24 164 IPR021852 -
Vvi18g0078 187 PANTHER MIR-INTERACTING SAPOSIN-LIKE PROTEIN 5 170 IPR042415 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0078 K22936 - vvi:100242718 373.244