Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0072 ATGGCTGCCTTTTCAAATTCGTTGGTTCATTTTTCATCTGGTGCTTGTTTGAAGCCAGTGGACCGGTATCTTGGTAGTTTGGGCCCCACCAATTTGTCTTTCAATCCAAATCATGTTGGGAAAGTGCAATTTTTTACCTCTAAAAGGGCACTTACAGTCCAAGCAGCATATAGTGACGATGGTGGAAAGCAAAGCAATGCAAACTTCTTTTTGGGTGGCTTTGTTTTGGGAGGATTAATAGTTGGCACGCTCGGTTGTGTATATGCACCTCAGATTAGCAAGGCACTGGCTGGAGCTGATCGGAAGGATTTAATGAGGAAACTGCCCAAATTCATCTATGATGAAGAAAAGGCTTTGGAGAAAACACGGAAAATACTGGCACAGAAGATCGACCAACTGAACTCTGCCATAGATGATGTTTCTTCTCAGCTCCGATCAGAAGATTCCCCAGATGAAGCAGATGATGCCCCAAATGGAGCGACTATTAACTCAGATGAAATGGAAGCTGCCATATGA 516 0.436 MAAFSNSLVHFSSGACLKPVDRYLGSLGPTNLSFNPNHVGKVQFFTSKRALTVQAAYSDDGGKQSNANFFLGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKILAQKIDQLNSAIDDVSSQLRSEDSPDEADDAPNGATINSDEMEAAI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0072 171 PANTHER LOW-DENSITY RECEPTOR-LIKE PROTEIN 1 171 IPR040377 -
Vvi18g0072 171 MobiDBLite consensus disorder prediction 139 171 - -
Vvi18g0072 171 Coils Coil 116 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0072 Vvi-Chr18 673537 679430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0072 - - vvi:100242710 319.701