Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0070 ATGGCCAGGCGTCATGGATGGGAACTCCCTGCTCACACGTTTCAGGTTGTGGCTATAACAGTCTTTTTCTTGCTATCTGTCGCATTTTATGCCTTTTTTGCTCCCTTCCTTGGGAAGGATATCTATGAATATGTGGCAATCAGTGTTTATTCTTTCTTGGCGCTTTCTGTATTTATACTTTATGTTAGATGCACAGCTATTGACCCTGCTGATCCTGGAATTCTGATTGAAGGTGACAAGACATCAACCTATAGATCGCATAATGACGCAGATCTTCCTGGGAATGCATCTTCTATTGAAGAACCCAGCAAGATTGGATTGAAAAATGGAGAAAAATCAGACAGGCGTGGTTCAAGTTGTTGTTCCAAACTTGGAGGATTCTTTTGTGGATTTGTCATAAAGGAAGACTGCCGCAAAGATGATGATCTTCTGAAGCAACAATCTGGGGAGGAAGATGCACTGTTCTGTACATTGTGCAATGCTGAGGTACGCAAATTCAGCAAACATTGCAGAAGTTGTGACAAATGTGTCGATGGGTTTGATCATCATTGTCGTTGGTTAAATAATTGTGTGGGGAGGAAAAATTATATCACGTTCGTGTGCCTTATGGCAGTGAGCCTTGTCTGGCTCATCGTTGAGTTTGGGGTTGGTGTTGCCGTCCTTGTTAGATGCTTTGTTGACAGGAAGGATACAGAAAATCAGATTGTTGAAAGGCTTGGAGTTGGATTTTCCCGGCCCCCCTTTGCTACTATAGTGGCCCTTTGTACAGCTGTTTCATTGCTGGCCACAGTCCCTTTGGGGGAACTATTCTTTTTCCACATGATTCTGATGCGAAAGGGTATCACAACCTATGAGTATGTTGTTGCCATGAGAACCCAGAGTGAACCTCCTGGACCATCTGTAGATGGAGGAGAGCAGCAAAGTATGCCATCTTCTCCAACCAGCTCTGCTGTGACAGCCATGAGTGGAAGAAGTTCTCTTGGAATGAGCTTGCAGTACAAAGGTGCTTGGTGTACTCCTCCCAGAATCTTCATGGATCACCAGGATGAAATAATCCCACATCTTGAGCCTGGAAGGCTTCCATCCACAGTAGACCCAGATGCCATACAACCACATGACAAGGGGAAAAGATTACCTCAACGTCCGGTCCGAATCAGTGCATGGAAGCTTGCAAAATTGGATTCTAATGAGGCGATTAAAGCAGCTGCTAAGGCTAGAGCATCGTCATCTGTCCTAAGACCATTAAGCTCTCAACACCATCAATATGATGCTGATCATCTATCCAGTGGTGATACGAGTGGCAGAAGCAGTCCAATCAGTACCAATCAACGATTCCAAGCCAGAAATTCTCGAGTAGGGACGTCAAGGTTGTCTCCTTCCAAGAGCTCATATCCTCCCAGTCGTGCTAGCGGAGAAGATCTTGATACATGTGCTCACAGCTTTAGTAACATTAGCAGTCCTATCGGCGCCACCATCTCCCCATCTCCAATGGAGCTGCGGGCATCAAACAGAGATCACTTCAACCCCATATATCAGTCATCAGCGGGCCAATCTCCTTGGTCAGCAAGAGCAAGTGATGTGAATGAAAGTGCTGCTGCTGCTGTTCGTGATAATCTAGCACAAATCCCCATGACGAAAAACTACTTCGGTGCTGGAGATAACTCAAGATCTTCGGTATTTTGGGATCAAGAGGCTGGGCGCTTTGTCTCCTCATCTTCCAGCACTGCTGGCGGTGCTGCTCAGGTTCCCAGAGCAGAGCTCACATATTCAGGTCAATCTATATTCTTTGGTGGTCCTCTCATGAATGAACAATCAACAAGAGGGGCAAGAAACCCGGGTTTTCGCTCTGCCAGCATGGAGAGAACTTCAACCTCAAATTACTATCAGCAGGGGAGATCCCAGAGGGGTGGCCAACTTCCTGTCTTTGTTCCAAGTGATTCCCAGCAAACCCAGTTCTCTTCCAGATTGCCTTGA 1974 0.4615 MARRHGWELPAHTFQVVAITVFFLLSVAFYAFFAPFLGKDIYEYVAISVYSFLALSVFILYVRCTAIDPADPGILIEGDKTSTYRSHNDADLPGNASSIEEPSKIGLKNGEKSDRRGSSCCSKLGGFFCGFVIKEDCRKDDDLLKQQSGEEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYITFVCLMAVSLVWLIVEFGVGVAVLVRCFVDRKDTENQIVERLGVGFSRPPFATIVALCTAVSLLATVPLGELFFFHMILMRKGITTYEYVVAMRTQSEPPGPSVDGGEQQSMPSSPTSSAVTAMSGRSSLGMSLQYKGAWCTPPRIFMDHQDEIIPHLEPGRLPSTVDPDAIQPHDKGKRLPQRPVRISAWKLAKLDSNEAIKAAAKARASSSVLRPLSSQHHQYDADHLSSGDTSGRSSPISTNQRFQARNSRVGTSRLSPSKSSYPPSRASGEDLDTCAHSFSNISSPIGATISPSPMELRASNRDHFNPIYQSSAGQSPWSARASDVNESAAAAVRDNLAQIPMTKNYFGAGDNSRSSVFWDQEAGRFVSSSSSTAGGAAQVPRAELTYSGQSIFFGGPLMNEQSTRGARNPGFRSASMERTSTSNYYQQGRSQRGGQLPVFVPSDSQQTQFSSRLP* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0070 657 MobiDBLite consensus disorder prediction 355 380 - -
Vvi18g0070 657 MobiDBLite consensus disorder prediction 410 469 - -
Vvi18g0070 657 ProSiteProfiles DHHC domain profile. 154 204 - -
Vvi18g0070 657 MobiDBLite consensus disorder prediction 299 320 - -
Vvi18g0070 657 MobiDBLite consensus disorder prediction 90 117 - -
Vvi18g0070 657 MobiDBLite consensus disorder prediction 600 657 - -
Vvi18g0070 657 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 21 293 - -
Vvi18g0070 657 MobiDBLite consensus disorder prediction 410 474 - -
Vvi18g0070 657 Pfam DHHC palmitoyltransferase 152 288 IPR001594 GO:0016409
Vvi18g0070 657 MobiDBLite consensus disorder prediction 295 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0070 Vvi-Chr18 653885 659188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0070 155 196 Lipid Metabolism Gene Families AT4G22750 45.238 2.79e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0070 K20027 - vvi:100254706 1310.43