Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0068 ATGGCGTCAATTCGGAGCATTCACAGATGGGATGTTGATAATCTCCTCCTCACCCCAACATCATCGGCCATCCAAACGCAGCCTCCAAAGCATGTGATTCTTCCAATGCCCATTTCCAGAAGATGCGCTATTTTGATTTCTGTGTTACCTTTCAGTGTCATTTCACAACCCCATTCATCAGACGCCAGAGAGAGGCGCACCAAAAAGAACATCCCTCTTGAGGACTACCTCACTAGTCCTGATGGATTGAAATACTATGATGTTGTTGATGGAAATGGACCAGTAGCTGAAAAAGGTTCATCTGTCCAGGTGCATTTTGACTGTATATATCGCAGCATTACAGCAGTGTCAAGTCGAGAGTCAAAACTCTTGGCTGGAAATCGAATCATTGCTCAGCCGTATGTGTTCAAGGTTGGGGCCCCTCCTGGCAAAGAGCGGAAGCGTGAATTTGTAGACAACCCGAATGGTTTATTTTCTGCACAAGCTGCACCTAAACCCCCACCAGCTCTGTACTCAATTACTGAAGGGATGAAAGTAGGGGGAAAGAGGACTGTGATTGTTCCTCCAGAGGCTGGGTATGGCCAAAAGGGAATGAGTGAGATCCCGCCAGGAGCTACTTTTGAGCTTAATGTGGAGCTTCTGCAAGTATTGCCACCAGAAGGAAAGTAG 669 0.4694 MASIRSIHRWDVDNLLLTPTSSAIQTQPPKHVILPMPISRRCAILISVLPFSVISQPHSSDARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGPVAEKGSSVQVHFDCIYRSITAVSSRESKLLAGNRIIAQPYVFKVGAPPGKERKREFVDNPNGLFSAQAAPKPPPALYSITEGMKVGGKRTVIVPPEAGYGQKGMSEIPPGATFELNVELLQVLPPEGK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0068 222 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 99 217 IPR001179 GO:0003755
Vvi18g0068 222 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 1 221 IPR044180 -
Vvi18g0068 222 SUPERFAMILY FKBP-like 65 216 - -
Vvi18g0068 222 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 94 214 IPR001179 GO:0003755
Vvi18g0068 222 Gene3D - 55 220 IPR046357 GO:0003755
Vvi18g0068 222 FunFam Peptidylprolyl isomerase 59 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0068 Vvi-Chr18 642852 645549 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0068 K01802 - vvi:100254701 447.588