Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0067 ATGGGGTTTCGGTTCGATCTATTTATCGTTTTAATCGCCATACTTTCAGTACCCGTGCTTTCCGATTTGATCCTCTCCAAGGTTGATCGGCGCATTGATTTGACATCCCAAGTAGTACGCATCACTTCAACACTCAAGGTGGAGAATTCGGGAAATGATCCAGTCTCAGAGGTTTTGTTGGCCTTTCCTGAACACCAGGAGAAAAATTTGGCATATTTAACAGCAAGCTTTCGTGAAGGGAAAGGAAAAGGCAAAGGTTCTACCTCCAGTCTCCCTGTTGAAGTTGTCCACCCTCAAGGAATGCCCCCAGCATTGGTCTTTTATTCAGTGTCTTTACCCAAGGGACTGGGTAAAGGGGAAAGTTTGACTTTGGATGTCTTGGTTGTATTCACTCATTCACTGAAACCATTTCCTAAGGAAATCACTCAGGCAGATTTTCAGCTCGTCGTGTTCCAGGATAGTGGACATTATCTCTCTCCTTATGAAGTCAAGTTCCAGTCACTTAGTGTTAAGTTGCCTGATGCAAGAATTGAATCTTATACTAGACTAGAGAATACCAAGACAGTTGGTTCCGAGATCAAATATGGCCCATATGAGAATCATCCCCCCTTCTCATACTCACCTATAGTTGTCCATTTTGAGCAAAATCAACCCTTTGCTGTTGCTGAACAGTTAGTGAGAGAAATAGAAATTTCCCACTGGGGCAATGTGCAAGTCACAGAACATTATAAACTCATCCATGCAGGTGCTCAGAGCAAGGGGGAATTTTCGAGGCTTGATTATCAAGCCAGACCACATGTGAGAGGTGCATCAGCATTTAGGCATCTTGTTGCAAAATTGCCACCAAGAGCTCATTCTGTTTATTTCAGGGATGAAATTGGCAACATTTCAACATCTCATTTGTGGGGTGATTTGAAGAAGACGGAACTGGAAATTGAGCCTAGATATCCAATGTTTGGTGGGTGGAGAACTTCCTTTTTCATTGGATATGGCCTGCCACTCCAGGACTTTTTATTTGAGTCAGGGGGAAAACGTTTCCTCAACATCACTTTTGGGTGTCCGATGAATGAGGTTGTCATTGACAATCTCATTGTGAAGGTTGTTCTACCTGAGGGATCCAGAGATATTTCTGTTTCTGCTCCATTTGCGGTAAAACAATGGCAAGAGACAAAACTTTCCCATTTGGACATTGTTGGTAGACCTGTGGCTGTGCTAGAAAAGACCAATGTTGTGCCAGAGCATAATCAACATTTTCAGGTCTATTACAAGTTCAACAACATTTCATTGCTTAGGGAGCCGCTGATGCTGATTTCTGGGTTTTTCTTCCTTTTTGTCACTTGCATTGTATATATGCATGTTGACATGTCAATCTCCAAGTCTTCTGCTTCTTATGTGATGAAATTACTGTGGGAAGAGATCCAGGCAGCAATTCAGCAGGTTCATGATATCATTAGCCGATGTTTATCCATCCATGATAAACTAGAAGCATCATTACGTGATCTCTCCAGGACTGGGGATGTTCAAGCTTGTAAAGCAGCTCGTAAAGCATCTGATGGTCAATTGAAAGAGCTTTCAAAAGAGTTGAGGCCCCTACTGGCATTCTTGCAATCTTCTCCACAGGCTGCCCAGATATTGCCCAAGGTGGAGGAGCTGGTTGCCAAGGAGAGAGAGTTGCAAGAGAAACTAATGTTAAAACATACAACAGTTGCCGATAGTTATGAGAAGAAGTCCGGGGGAAAGGAAATTGAGAACCGAATTGCTTCACAGCAGCAGAAAATTGTAGCTCTAAGACAGGAGGTCGATGATCTTCTTGACTACATTGATGAGATATAG 1833 0.4277 MGFRFDLFIVLIAILSVPVLSDLILSKVDRRIDLTSQVVRITSTLKVENSGNDPVSEVLLAFPEHQEKNLAYLTASFREGKGKGKGSTSSLPVEVVHPQGMPPALVFYSVSLPKGLGKGESLTLDVLVVFTHSLKPFPKEITQADFQLVVFQDSGHYLSPYEVKFQSLSVKLPDARIESYTRLENTKTVGSEIKYGPYENHPPFSYSPIVVHFEQNQPFAVAEQLVREIEISHWGNVQVTEHYKLIHAGAQSKGEFSRLDYQARPHVRGASAFRHLVAKLPPRAHSVYFRDEIGNISTSHLWGDLKKTELEIEPRYPMFGGWRTSFFIGYGLPLQDFLFESGGKRFLNITFGCPMNEVVIDNLIVKVVLPEGSRDISVSAPFAVKQWQETKLSHLDIVGRPVAVLEKTNVVPEHNQHFQVYYKFNNISLLREPLMLISGFFFLFVTCIVYMHVDMSISKSSASYVMKLLWEEIQAAIQQVHDIISRCLSIHDKLEASLRDLSRTGDVQACKAARKASDGQLKELSKELRPLLAFLQSSPQAAQILPKVEELVAKERELQEKLMLKHTTVADSYEKKSGGKEIENRIASQQQKIVALRQEVDDLLDYIDEI* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0067 610 PANTHER RIBOPHORIN I 9 465 IPR007676 GO:0006486|GO:0016020
Vvi18g0067 610 Pfam Ribophorin I 25 450 IPR007676 GO:0006486|GO:0016020
Vvi18g0067 610 Coils Coil 579 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0067 Vvi-Chr18 635624 640934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0067 17 548 Miscellaneous Gene Families AT1G76400 66.165 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0067 K12666 - vvi:100249589 1196.42