Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0063 ATGAACGGAGCTGTGCTAGTGGCTATTGCAGCCGCGATTGGTAACTTTCTGCAAGGATGGGATAATGCTACTATTGCAGGGGCTATTGTTTACATAAAGAAGGAGCTTGATTTGGAAAGCACTGTAGAAGGGCTTGTTGTGGCTATGTCCCTCATTGGAGCCACATTGGTCACAACATGCTCAGGAGCCATATCGGATTGGATTGGTCGGCGTCCAATGTTAATAGTCTCATCAATGCTTTATTTTATCAGTGGTTTGATAATGTTATGGTCACCAAATGTCTATGTTCTACTTATAGCTAGGTTACTTGATGGATTTGGAATTGGTCTAGCAGTTACTCTTGTTCCCATTTATATATCTGAGACTGCCCCAGCAGATATAAGGGGATCATTAAATACTCTTCCACAATTCACTGGTTCTGGTGGAATGTTTTTATCATACTGCATGGTTTTTGGGATGTCATTGTTAAGCTCACCAAGCTGGAGGTTAATGCTTGGGATTCTTTCAATTCCATCCCTTCTTTATTTTGCTTTGACAGTATTTTACTTGCCCGAATCCCCACGGTGGCTTGTAAGTAAAGGAAGGATGGTTGAGGCTAAAAAGGTTCTTCAAAGATTACGTGGCAGGGAAGATGTTTCAGCTGAAATGGCTTTGCTGGTTGAGGGTCTTGGGATTGGGGGTGAAACATCCATAGAAGAGTACATAATAGGGCCAACTGGTGAGCTTACTGAAGATCAGGATCCAGATGCTGTGAAAGACCAAATCAAGTTATATGGACCTGAAGCTGGCCTCTCCTGGGTTGCCAAACCTGTTCCTGGTGGACAGAGTACCCTTAGTCTTGTGTCTCGCCAAGGAAGCTTGGCAACCCAGACTCTGCCTCTTATGGATCCTCTCGTCACTCTGTTCGGTAGTGTCCATGAAAAGCTCCCTGAAACGGGAAGTATGCGAAGCATGCTTTTTCCCAATTTTGGCAGCATGTTCAGTACAGCAGATCCTCAGATTAAAACTGAACAGTGGGATGAAGAGAGCCTACAGCGGGAAGGTGAAGACTACGCATCAGATGGTGGGGGAGACTCTGACCATGATTTGCAAAGTCCATTAATATCTCGCCAGACAAGCAGCATGGAAAAGGACATGGTGCCCCCTCCTTCCCATAGCAGCATAATGAGCATGAGGCGTCATAGCAGTCTGATGCAAGGAACTGCTGGTGAGGCAGCTGGTGGTATGGGAATTGGTGGTGGTTGGCAGTTGGCATGGAAATGGTCTGAGAGAGAAGGTGAAGATGGAAAGAAGGAAGGAGGATTTAAAAGGATTTATTTGCATGAGGAGGGAGTCCCCGGATCCCGACGTGGGTCTCTTGTTTCACTTCCTGGTGGAGATGTTCCTGCAGAGGGCGATTATATCCAGGCTGCTGCTCTAGTGAGTCAGCCTGCTCTTTACTCTAAGGAGCTTATGGATCAGGATCCAGTTGGACCTGCAATGGTTCACCCAGCTGAAACTGCTTCAAGAGGGCCAATGTGGGCTGCTCTTCTTGAACCAGGAGTCAAGCATGCATTGTTTGTTGGGGCCGGAATTCAGATACTTCAGCAGTTCTCTGGCATCAATGGAGTTTTGTACTACACTCCTCAGATTCTTGAGGAGGCAGGTGTTGAAGTTCTTCTCGAGAGCTTGGGGCTGGGTACGGAGTCTGCATCGTTCCTTATCAGTGCATTCACAACCCTCTTGATGCTTCCTTGTATAGTTGTCGCCATGAAGCTCATGGATATTGTCGGCAGAAGGCGCCTGCTGCTCACTACAATTCCTGTGCTGATCGTCACACTTCTCGTCCTAGTCATCGGCGACCTTGTGACCACGACCACAGTGATCCATGCAGCGATCTCTACTGCATGTGTTATCATCTATTTCTGCTGTTTTGTGACGGCGTATGGACCAATCCCTAACATCCTCTGCTCTGAGATCTTCCCCACAAGGGTCCGAGGCCTGTGCATTGCCATATGCGCTCTAGTTTACTGGATTGGGGACATCATCGTCACCTATACGTTACCGGTGATGCTGACTTCAATCGGGTTGACGGGTATCTTTGGAATTTATGCAGTTGTGTGTGTGATTTCTTGGGTGTTTGTGTTCTTGAAGGTGCCCGAGACAAAAGGCATGCCACTTGAAGTGATTGCTGAGTTCTTTGCAGTTGGAGCAAGGCAGGTTACTGCAGCAAAGAATGACTGA 2223 0.4719 MNGAVLVAIAAAIGNFLQGWDNATIAGAIVYIKKELDLESTVEGLVVAMSLIGATLVTTCSGAISDWIGRRPMLIVSSMLYFISGLIMLWSPNVYVLLIARLLDGFGIGLAVTLVPIYISETAPADIRGSLNTLPQFTGSGGMFLSYCMVFGMSLLSSPSWRLMLGILSIPSLLYFALTVFYLPESPRWLVSKGRMVEAKKVLQRLRGREDVSAEMALLVEGLGIGGETSIEEYIIGPTGELTEDQDPDAVKDQIKLYGPEAGLSWVAKPVPGGQSTLSLVSRQGSLATQTLPLMDPLVTLFGSVHEKLPETGSMRSMLFPNFGSMFSTADPQIKTEQWDEESLQREGEDYASDGGGDSDHDLQSPLISRQTSSMEKDMVPPPSHSSIMSMRRHSSLMQGTAGEAAGGMGIGGGWQLAWKWSEREGEDGKKEGGFKRIYLHEEGVPGSRRGSLVSLPGGDVPAEGDYIQAAALVSQPALYSKELMDQDPVGPAMVHPAETASRGPMWAALLEPGVKHALFVGAGIQILQQFSGINGVLYYTPQILEEAGVEVLLESLGLGTESASFLISAFTTLLMLPCIVVAMKLMDIVGRRRLLLTTIPVLIVTLLVLVIGDLVTTTTVIHAAISTACVIIYFCCFVTAYGPIPNILCSEIFPTRVRGLCIAICALVYWIGDIIVTYTLPVMLTSIGLTGIFGIYAVVCVISWVFVFLKVPETKGMPLEVIAEFFAVGARQVTAAKND* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0063 740 Gene3D MFS general substrate transporter like domains 2 240 IPR036259 -
Vvi18g0063 740 SUPERFAMILY MFS general substrate transporter 6 721 IPR036259 -
Vvi18g0063 740 MobiDBLite consensus disorder prediction 337 357 - -
Vvi18g0063 740 ProSitePatterns Sugar transport proteins signature 2. 103 128 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 ProSitePatterns Sugar transport proteins signature 1. 583 599 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 716 IPR020846 GO:0022857
Vvi18g0063 740 FunFam Monosaccharide-sensing protein 2 480 729 - -
Vvi18g0063 740 FunFam monosaccharide-sensing protein 2 2 247 - -
Vvi18g0063 740 Pfam Sugar (and other) transporter 505 727 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 Pfam Sugar (and other) transporter 7 220 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 5 731 - -
Vvi18g0063 740 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 Gene3D MFS general substrate transporter like domains 482 729 IPR036259 -
Vvi18g0063 740 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 PRINTS Sugar transporter signature 529 539 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 PRINTS Sugar transporter signature 651 663 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 PRINTS Sugar transporter signature 628 649 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi18g0063 740 MobiDBLite consensus disorder prediction 337 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0063 Vvi-Chr18 614215 618895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0063 1 740 Organic Solute Cotransporters AT4G35300 71.467 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0063 - - vvi:100232977 1351.65