Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0061 ATGGCAGAAGAAACAAACCCAAGGAATTCCAGCACCCAGCTCTTAGCAGAACTGGAAGAGCTCAGTCAGTCCCTCTACCAGTCCCACACTGCTCGAAGAACTGCCTCCCTTGCTCTCCCTCGAAGCTCAGTTCCCCCAATATTATCCGCTGATGAAGCCAAAAATGAGGAGAAATCCAGCACCAGGGGGCGATCCAGGCGCATGTCTCTCTCACCATGGCGGTCTAGGCCAAAGCTCGATGATGGAAATGGGCAGAAGGATCAGCCAAAGCCTTTGAGCCAGCAACCCATCACGAAGTTGAATGAAAAGGCAGCTTCAGCAGAGAAGAAAGGAATTTGGAACTGGAAGCCAATTCGAGCCCTTTCGCACATTGGGATGCAGAAGCTGAGCTGTTTGTTCTCTGTCGAAGTTGTCACTGTCCAAGGACTTCCAGCTTCTATGAACGGACTCCGGCTTTCAGTTTGTGTTAGGAAGAAGGAAACCAAGGAAGGCGCAGTTCACACAATGCCATCAAGAGTTTCACAGGGAGCAGCTGATTTTGAAGAGACTATGTTTCTTAAGTGTCATGTTTACTGCAGTTATGACAGTGGAAAACAGCAAAAATTTGAGCCACGACCATTTTTGATCTATGTGTTTGCAGTTGATGCTCAAGAGCTTGATTTTGGAAGAAGTTTGGTGGATTTGAGTCTCCTTATTCAGGAGTCCATAGAGAAAAGCGCTGAAGGTACACGAGTTCGACAATGGGACATGAGCTTCAATCTATCAGGGAAAGCAAAAGGAGGAGAACTTGTTCTGAAATTGGGATTTCAGATTATGGAGAAAGATGGGGGGGTTGGAATTTATAGTCAGTCTGAGGGATTGAAGTCCGGTAAATCTATGAATTTCGCATCCTCTTTTGGCCGTAAGCAGTCGAAATCATCCTTTAGCATCCCCAGTCCAAGGATGTCAAGCCGATCAGAAACTTGGACTCCTTCACAGGGAGGAGCAACTGGAGATCTCCAAGGTATTGATGACTTGAATCTTGATGAACCTGCTCCAGTGCCTTCAACCTCTCCCTCTATTCAAAAGTCAGAAGAAACTGAATCAAAGATAGAAGATCTAGACGTTCTGGATTTTGATGTTGTGGACAAAGGAGTTGAGATCCAAGACAAAGAAGAGGCTGGCGAAGGAGAGATGAAAGAAAATGTTGATAAAAGGTCTGTGTCAAGTGAGGTTGTGAAGGAAGTTGTGCATGATCAGGTCCATCTTACAAGATTAACTGAGCTTGATTCCATTGCTCAGCAGATAAAAGCTCTTGAATCAATGATGGGGGGAGAAAAACTCAACAAAACAGAGGAAGAAACAGATGTGCCGAGACTGGATGCAGACGAAGAAACAGTGACTAGAGAATTTCTTCAGATGCTAGAGGCTGAAGATGATAGTGAATTGAGATTCAATCAATCTGATATCCCACCTCTAAAGCTGGAAGGAGTTGAGGATTCTACAGAGGCAGATACCATGGTTTTTCTCCCAGATCTTGGAAAGGGCCTGGGCTGTGTGGTTCAGACCAGGGATGGAGGCTACTTAGCTGCCATGAATCCTCTAGATACTGCAGTAACAAGGAAGGACACCCCAAAACTTGCAATGCAGTTATCAAAAGCTTTAGTCCTTACCTCTCATAAATCCATGAATGGGTTCGAGTTATTTCAGAAGATGGCTGCAACTGGGCTTGAAGAACTCAGCTCAGAAATTTTATCTTCAATGCCCCTTGATGAACTTATAGGTAAGACAGCTGAACAGATAGCTTTTGAAGGCATTGCTTCAGCAATCATCCTCGGAAGGAACAAAGAAGGTGCTAGCTCAAGTGCTGCCCGTACCGTTGCTGCAGTTAAAACCATGGCAACTGCAATGAATACAGGCAGGAGGGAGAGAATCTCAACAGGAATATGGAATGTGAATGAAGACCCATTGACAGTGGATGAGATTCTAGCATTCTCAATGCAGAAGATTGAGGCTATGGCAGTTGAAGCTCTGAAAATTCAGGCAGATATGGCTGAGGAAGATGCCCCGTTTGAAGTTTCTTCACTCGTTGGAAAAACAGCCACAACCAGTGGTAAAGATCAAAATCATCCCCTTGCCTCTGCCATTCCACTTGAGGAATGGATGAAAAATAGTAGTTTGAATACTTCTGATGGAGACTCTGAGAGCCAAACAACCCTCACACTAACAGTGGTTGTTCAGCTGCGGGATCCAATAAGGCGATTTGAGTCAGTTGGGGGCCCAGTGATAGTGTTGATTCATGCAACACATGCTGATGTAAAGCCAAAAACATATGATGAAGACAAGAGATTCAAAGTCGGAAGTTTGCATATAGGAGGTCTGAAAGTAAAAAAGGGGGGTAAGAGGAATGTGTGGGATACCGAGAAGCAGAGGCTGACAGCAATGCAGTGGCTGTTGGCATTCGGATTGGGGAAGGCAGGAAAAAAAGGAAAACATGTCCCCTCAAAAAGCCAGGATATATTATGGAGCATTTCCTCACGTGTAATGGCAGACATGTGGCTCAAATCAATGAGGAACCCAGACATAAAGTTCACTAAGTAA 2580 0.4492 MAEETNPRNSSTQLLAELEELSQSLYQSHTARRTASLALPRSSVPPILSADEAKNEEKSSTRGRSRRMSLSPWRSRPKLDDGNGQKDQPKPLSQQPITKLNEKAASAEKKGIWNWKPIRALSHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKEGAVHTMPSRVSQGAADFEETMFLKCHVYCSYDSGKQQKFEPRPFLIYVFAVDAQELDFGRSLVDLSLLIQESIEKSAEGTRVRQWDMSFNLSGKAKGGELVLKLGFQIMEKDGGVGIYSQSEGLKSGKSMNFASSFGRKQSKSSFSIPSPRMSSRSETWTPSQGGATGDLQGIDDLNLDEPAPVPSTSPSIQKSEETESKIEDLDVLDFDVVDKGVEIQDKEEAGEGEMKENVDKRSVSSEVVKEVVHDQVHLTRLTELDSIAQQIKALESMMGGEKLNKTEEETDVPRLDADEETVTREFLQMLEAEDDSELRFNQSDIPPLKLEGVEDSTEADTMVFLPDLGKGLGCVVQTRDGGYLAAMNPLDTAVTRKDTPKLAMQLSKALVLTSHKSMNGFELFQKMAATGLEELSSEILSSMPLDELIGKTAEQIAFEGIASAIILGRNKEGASSSAARTVAAVKTMATAMNTGRRERISTGIWNVNEDPLTVDEILAFSMQKIEAMAVEALKIQADMAEEDAPFEVSSLVGKTATTSGKDQNHPLASAIPLEEWMKNSSLNTSDGDSESQTTLTLTVVVQLRDPIRRFESVGGPVIVLIHATHADVKPKTYDEDKRFKVGSLHIGGLKVKKGGKRNVWDTEKQRLTAMQWLLAFGLGKAGKKGKHVPSKSQDILWSISSRVMADMWLKSMRNPDIKFTK* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0061 859 MobiDBLite consensus disorder prediction 303 330 - -
Vvi18g0061 859 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 7 475 IPR039614 -
Vvi18g0061 859 MobiDBLite consensus disorder prediction 29 98 - -
Vvi18g0061 859 MobiDBLite consensus disorder prediction 303 366 - -
Vvi18g0061 859 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 126 274 IPR019448 -
Vvi18g0061 859 ProSiteProfiles C2 NT-type domain profile. 121 273 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0061 Vvi-Chr18 599561 602140 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0061 - - vvi:100244427 1602.42