Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0054 ATGGACTTGCAAGGGGTTGATTTCTCTCCTAGGCCACTGTCCAGAGCATCATTAAGTGACTTGCATTTCTTGGCCAACTTTATCATGAGCACTTACCTGGGTCCTGATGTCAAGTCTGACAACCCACGACGCTCAGCATCGCAAAGAGTTGCTGAAGGTTTGCCTCCGTACTCTTTAAATGATCTGGGTCTTTCATTTCTCAGTGTTTCTCAACTGGAGAGCTTATATTACTTTATCCTGAGGCATGCACTTCCTAACCTGGCATTGAGCCCATACTTGTTCCATATGTATCTGAAGGGAGACCTGCCTCTGCTGAACTCAGGTCTTCCCGAGGACAGACTGCAGTTTACAAGTTTTTTTCCTTTACATCTTCATGAACAGACAAGCTTCCTGAGAGGCCTTGACATTGTAAAGGGTATTATTCTTATAAGTGAACCTGATACATCATATATGAAACAAGATGTACTGGAAAGGTTTAGATACTTATCAGGTATGGATAGTTTGAAGATTGATATAAATGAAAGCCAAAGGTATCAACATAGGCACTGGACTGGCAGAGAAGAGATTGAACGGAATTTCTTGACAATTAGTGGAGGACCATATGCAGGAAATGCTTCCAATATAAATAGTATTTCACCATCCAAGGTCCAAGATGAATTTAAGAGAAGGCGTCTTCTTGAGCCTCTGGAAATGCCAGTGGTTCAGCATGTGCCTTCATTTTCACATGGTTCCCCGAGGCGTTGCAATTTGGATGGGCCTTCCATGATGCCCCTTCTATCTGTTTCAAATGCTGAAGAATGTAAATCAGAGGCATCTATTGTTTTGACTGGGGTAGCTGGAGAAGTGAGTGCTGGACCACCTATTGGTCGTGTGGACATTGGTGTTAGCAAAACTGCATATTTCTTTCGTGTTGCTCTACCTGGGGTCAGGAAAGATAACCGCCATTTTGGATGTGAGGTTGAGAACGATGGGAAGGTTCAAATCCATGGGTCAACCAGCGCTGGTGGAAGAACAATTGTGAAACATCCCCGGGTGTTCCAGATGAAGCTGCAGCAGCTATGCCCACCTGGGCCATTCACTGTATCTTTCAGGTTGCCAGGACCTGTTGATCCCAGGCTGTTCAAAGCTAACTTCAGATCAGATGGCATTTTTGAGGGCATCATAGTGAAATCTGAAGACATGGACTAG 1188 0.4436 MDLQGVDFSPRPLSRASLSDLHFLANFIMSTYLGPDVKSDNPRRSASQRVAEGLPPYSLNDLGLSFLSVSQLESLYYFILRHALPNLALSPYLFHMYLKGDLPLLNSGLPEDRLQFTSFFPLHLHEQTSFLRGLDIVKGIILISEPDTSYMKQDVLERFRYLSGMDSLKIDINESQRYQHRHWTGREEIERNFLTISGGPYAGNASNINSISPSKVQDEFKRRRLLEPLEMPVVQHVPSFSHGSPRRCNLDGPSMMPLLSVSNAEECKSEASIVLTGVAGEVSAGPPIGRVDIGVSKTAYFFRVALPGVRKDNRHFGCEVENDGKVQIHGSTSAGGRTIVKHPRVFQMKLQQLCPPGPFTVSFRLPGPVDPRLFKANFRSDGIFEGIIVKSEDMD* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0054 395 Gene3D - 288 395 IPR008978 -
Vvi18g0054 395 CDD ACD_sHsps-like 292 383 - -
Vvi18g0054 395 PANTHER INCREASED DNA METHYLATION 3 247 391 IPR039321 -
Vvi18g0054 395 FunFam Increased DNA methylation 3 290 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0054 Vvi-Chr18 565468 567910 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0054 - - vvi:100246169 796.964