Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g0053 | ATGGTGGGCATACATGAGAAAAGACTCAGGAAATGTCTGTCAAAATTAAAAGGAATAGAGAAGGTGGAAGTGGATGCCAATTCCCAGAAGGTGGTGGTGACAGGGTATGCACATAGAAACAAGATACTGAAAGCAGTGAAGAGAGGTGGGTTAAAAGTGGACTTCTGGTCTGCCCAGAATGAGCTGCTCACTGCTTATGCCAGTGCCAGTTATGCCAGTTATGGAAGCTTGAGATTCAACAACTTCAACTTCTTCTAG | 258 | 0.4419 | MVGIHEKRLRKCLSKLKGIEKVEVDANSQKVVVTGYAHRNKILKAVKRGGLKVDFWSAQNELLTAYASASYASYGSLRFNNFNFF* | 86 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g0053 | 85 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 54 | IPR006121 | GO:0046872 | |
| Vvi18g0053 | 85 | CDD | HMA | 6 | 53 | IPR006121 | GO:0046872 | |
| Vvi18g0053 | 85 | SUPERFAMILY | HMA, heavy metal-associated domain | 7 | 56 | IPR036163 | GO:0046872 | |
| Vvi18g0053 | 85 | Gene3D | - | 6 | 54 | - | - | |
| Vvi18g0053 | 85 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20-LIKE | 1 | 85 | - | - | |
| Vvi18g0053 | 85 | Pfam | Heavy-metal-associated domain | 7 | 48 | IPR006121 | GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi18g0053 | Vvi-Chr18 | 553803 | 554164 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g0053 | - | - | vvi:104882449 | 161.77 |