Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0050 ATGGCTCTGTATTTTCCACTTCCTCTCCGTTCTGGGTCCTGCGACTTCTCAGCTTATTCGAGTAAAAAAGGTTATGGGTCAAGAACCGGGAAATGTGGAAAAAAGCAACGTGTTGTCTTCTGCAAGAATGAGAACAAGGAAGAAGAAAAAACAAGTTTTGGGATTAAAGAACAACATGGAGGTGGAAGAAGGGAGGTTGTGCTACAGATGGTGTTCAGTACAATTTCCCTTCAGGCAATTGTTCCTAACGCACTGGCCGATACTGAGGTGCCAGAGGATTTCAAGGTTTACTCAGATGAGGTCAACAAGTTCAAAATACAGATTCCCCAAGATTGGCAGGTGGGTTCAGGAGAACCAAGTGGATTTAAATCAGTGACAGCATTCTACCCAGAAGAAGCTTCTGGTTCAAATGTCAGCGTAGTTATCACTGGGCTTGGCGCGGATTTTACCAGACTCGAGTCTTTTGGCAAAGTTGATGCTTTTGCAGAGAATCTGGTAAATGGATTGGATAGAAGCTGGCAAAGGCCCCCTGGTATTGCTGCAAAACTCATTGACTGCAGAGCTGCTAATGGGTTTTATTACATTGAGTATTGGCTTCAGAATCCTGGGGAAAGTCGTAGACATTTATTTTCAGCTGTTGGGATGGCAAACAACGTATTTGGAAGAAGAATCAGAAAAATTCAGTTCTAA 690 0.4319 MALYFPLPLRSGSCDFSAYSSKKGYGSRTGKCGKKQRVVFCKNENKEEEKTSFGIKEQHGGGRREVVLQMVFSTISLQAIVPNALADTEVPEDFKVYSDEVNKFKIQIPQDWQVGSGEPSGFKSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDRSWQRPPGIAAKLIDCRAANGFYYIEYWLQNPGESRRHLFSAVGMANNVFGRRIRKIQF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0050 229 SUPERFAMILY Mog1p/PsbP-like 94 218 IPR016123 -
Vvi18g0050 229 Pfam PsbP 93 218 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vvi18g0050 229 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 85 221 - -
Vvi18g0050 229 PANTHER - 36 218 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0050 - - vvi:100263326 446.817