Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0037 ATGGATTCAGATTTCGGCATTCCCAGAGAACTCTCGGATCTTCAAAAACATCGATGTCTTTACGAACCTGAACTCCCTCCTTGCCTTCAGGGGACTACTGTCAGGGTAGAATTTGGTGATGCAACAACTGCTTCAGACCTCTCTGGTGCCCGCACAATAAGCCGATCCTTTCCTCACACATATGGTCAGCCATTGGCTCACTTTCTCAGGGCTACTGCAAAGGTCCCTGATGCTCAGGTTATAACTGAGCATCCACCCATTAGGGTGGGAGTGGTCTTCTGTGGGAGACAATCTCCGGGAGGACACAATGTCATATGGGGTCTTCACAATGCTCTCAAAATTCACAACCCTAAGAATATTTTACTTGGGTTTTTGGGTGGCTCTGAAGGTTTATTTGCTCAGAAAACTCTTGAGATCACTGATGACATTCTTTCAACCTACAAGAATCAAGGTGGTTATGATTTGCTTGGACGGACAAAGGATCAAATAAGAACAACTGAACAAGTTAATGCTGCATTATCCACATGCAAAAATTTGAAGTTGGAGGGCCTTGTCATTATTGGAGGGGTGACATCAAACACAGATGCTGCTCAGCTTGCAGAAACCTTTGCAGAAGCAAAATGCCAAACAAAGGTGGTTGGGGTTCCTGTTAGTTTGAATGGGGATCTGAAGAACCAATTTGTTGAAAGCAATGTTGGTTTTGATACAATATGTAAGGTCAATTCCCAACTCATCAGCAATGTCTGCACTGATGCTCTTTCTGCAGAGAAGTATTATTATTTTATCCGACTCATGGGCCGGAAGGCATCACATGTTGCTTTGGAGTGCACTCTTCAGTCACATCCAAATATGGTCATTCTTGGTGAGGAGGTGGCTGCATCAAAGCTTACTCTTTTTGACTTGACAAAACAAATTTGTGATGCAGTTCAAGCCAGGGCTGAACAAGACAAGTATCATGGTGTCATCCTACTTCCTGAAGGACTTATTGAGAGCATTCCTGAAGTTTATGCTCTCTTGCAGGAAATTCATGGTTTGCTCAGGCAAGGTGTTTCTGCTGTTAACATTTCTTCTAAACTTTCACCTTGGGCATCTGCCTTGTTCGAATTCTTGCCACCCTTTATCAAGAAGCAGCTGCTCCTTTACCCTGAATCAGATGACTCAGCACAGTTATCTCAGATTGAAACAGAGAAACTTCTCGCACATCTTGTGGAGGCAGAAATGAACAAACGATTGAAGGAAGGTACATACAAGGGGAAGAAATTCAATGCCATCTGCCACTTCTTTGGTTATCAGGCTCGGGGATCCTTACCATCAAAATTTGACTGTGATTATGCCTACGTTCTTGGGCACATTTGCTACCATGTTCTAGCAGCTGGCTTAAATGGTTACATGGCAACTGTAACTAACCTAAAGAATCCTGTGAACAAATGGCGTTGTGGTGCCGCTCCAATCACAGCGATGATGACTGTAAAGCGTTATTCCCGTGGTCCTGGGACCTCTTCAATTGGAAAACCTGCTGTTCATCCTTATGCTTTGGATCTGAAGGGCAAAGCATACGAGCTTCTGAGTCAAAATGCAACAAAATTTTTGCTGGACGATCTTTACAGAAACCCAGGACCCCTCCAGTTTGATGGTCCAGGTGCTGATGCCAAGGCTGTGACTTTGTGCGTTGAGGACCAGGATTACATGGGTCGTATCAAGAAACTCCAGCAATATCTTGACAAGGTGCGAACCATTGTGAAACCAGGATGCTCACAGGATGTTCTCAAAGCAGCTTTGAGTGCCATGGCCTCTGTGACAGAGATTCTCTCTGTAATGACATCACCTTCTAGTGGCCAGACACCGCTTTGA 1851 0.4446 MDSDFGIPRELSDLQKHRCLYEPELPPCLQGTTVRVEFGDATTASDLSGARTISRSFPHTYGQPLAHFLRATAKVPDAQVITEHPPIRVGVVFCGRQSPGGHNVIWGLHNALKIHNPKNILLGFLGGSEGLFAQKTLEITDDILSTYKNQGGYDLLGRTKDQIRTTEQVNAALSTCKNLKLEGLVIIGGVTSNTDAAQLAETFAEAKCQTKVVGVPVSLNGDLKNQFVESNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRKASHVALECTLQSHPNMVILGEEVAASKLTLFDLTKQICDAVQARAEQDKYHGVILLPEGLIESIPEVYALLQEIHGLLRQGVSAVNISSKLSPWASALFEFLPPFIKKQLLLYPESDDSAQLSQIETEKLLAHLVEAEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHVLAAGLNGYMATVTNLKNPVNKWRCGAAPITAMMTVKRYSRGPGTSSIGKPAVHPYALDLKGKAYELLSQNATKFLLDDLYRNPGPLQFDGPGADAKAVTLCVEDQDYMGRIKKLQQYLDKVRTIVKPGCSQDVLKAALSAMASVTEILSVMTSPSSGQTPL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0037 616 PIRSF PPi_PFK_PfpB 4 570 IPR011183 GO:0005524|GO:0006096|GO:0047334
Vvi18g0037 616 Gene3D Phosphofructokinase; domain 3 332 396 - -
Vvi18g0037 616 Pfam Phosphofructokinase 88 454 IPR000023 GO:0003872|GO:0006096
Vvi18g0037 616 Hamap Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 10 561 IPR011183 GO:0005524|GO:0006096|GO:0047334
Vvi18g0037 616 FunFam Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 332 396 - -
Vvi18g0037 616 NCBIfam diphosphate--fructose-6-phosphate 1-phosphotransferase 14 558 IPR011183 GO:0005524|GO:0006096|GO:0047334
Vvi18g0037 616 Gene3D - 18 512 - -
Vvi18g0037 616 Gene3D Phosphofructokinase domain 234 547 IPR035966 GO:0003872|GO:0006096
Vvi18g0037 616 PANTHER PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE 2 567 - -
Vvi18g0037 616 SUPERFAMILY Phosphofructokinase 12 558 IPR035966 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0037 Vvi-Chr18 425521 432667 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0037 K00895 - vvi:100249662 1231.85