Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0033 ATGGAAGATGTTCAGAGGTTAGACCCGGAGACGGAGTTTCTCTGCTCGAAGCAAGAGACGGGAAACGAATGGGAACTCTTCAAGGAGAACGTGAGGCCACTGAAGAGAGGCCGAAACATTCATCTCTTGAACAACGCTCTCAAAGCTCAAACGGACAATCAATTGAAGCATTCTCTTCTTGAGAACCGAAGGAAGTTGATACAGGCTATTGATGAGTACCAAGGAGATGATCCTCTCCAGCCATGGATTCGGTGCATAAAATGGGTTCAGGAGGCCTTCCCTCCTGGTGGAGACTACTCAGGACTTGTTGTTATTTATGAACAATGTGCACGCACTTTTTGGCATGAAGACCGCTACAAGGATGATCTTCGCTACCTGAAAGTGTGGCTAGAATATGCTGAAAATTGTGTTGATGCGGAAGTCATATATAGTTTTCTGGATGCAAATAAAATTGGGCAATCACATTCTTCGTACTATATATCATATGCTCTTCACATGGAGTCCAAAAATAAGGTCAAATGTGCCAATGACATATTCAATCTTGGGATAGAAAGGAATGCTCAACCAATAGAAAAGTTGAAGGCAGCCTATAAGAAATTTTTTGCCCGCTGTCTAACAAGACCAAAAGCTACAGAGGATGACTTAACAGAAAAGCATTTACCAGTTCGAAGCTTTGGAACTGTCCTGGCTAGAGGAGAAAATCAAAGACAAACTGCAGGGGGTTCTGATCTTGCTAGGAAGAAACTGAAGCCAGATAGGAATAATGCAATTTCCATATATAAAGATACAGATACTGGTGTTAGCATGGTTCATCAACCAGATGGTTCAAACAATGAAATGAAATTGTGGCACAGTCTTGGAAGTCGAGCTGAGAGAAACAAAGAAAATAATGCAATCCCTGCCAAGTGGACATCCTATAAGATTCCACAAAGAGCTGTGCCTAGAATTGGACGACCAGCTGCAACTCCCAGAATTGAGGTGTTTGTTGATGAGGAGTATGCAGAAATGCCCGAAATGGGTGGTGAGGATGGGAAGCCTTCAACTTCGCAGCTCAAGCAGGGGGATGGCGTAGACCTTAAGAGGGAAACACAGTTATTGAGGGAAAATCCATTGCGAAATTTCCCACTCAACAGTCTTCCCAGATGA 1146 0.4328 MEDVQRLDPETEFLCSKQETGNEWELFKENVRPLKRGRNIHLLNNALKAQTDNQLKHSLLENRRKLIQAIDEYQGDDPLQPWIRCIKWVQEAFPPGGDYSGLVVIYEQCARTFWHEDRYKDDLRYLKVWLEYAENCVDAEVIYSFLDANKIGQSHSSYYISYALHMESKNKVKCANDIFNLGIERNAQPIEKLKAAYKKFFARCLTRPKATEDDLTEKHLPVRSFGTVLARGENQRQTAGGSDLARKKLKPDRNNAISIYKDTDTGVSMVHQPDGSNNEMKLWHSLGSRAERNKENNAIPAKWTSYKIPQRAVPRIGRPAATPRIEVFVDEEYAEMPEMGGEDGKPSTSQLKQGDGVDLKRETQLLRENPLRNFPLNSLPR* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0033 381 ProSiteProfiles BUB1 N-terminal domain profile. 66 224 IPR013212 -
Vvi18g0033 381 Gene3D - 17 204 - -
Vvi18g0033 381 SMART mad3_bub1_i 59 183 IPR013212 -
Vvi18g0033 381 MobiDBLite consensus disorder prediction 337 381 - -
Vvi18g0033 381 Pfam Mad3/BUB1 homology region 1 62 183 IPR013212 -
Vvi18g0033 381 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 215 335 IPR015661 GO:0007094
Vvi18g0033 381 FunFam Mitotic spindle checkpoint protein BUBR1 15 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0033 Vvi-Chr18 399190 410690 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0033 K02178 - vvi:100244507 786.178