Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0028 ATGACGGCAGAGACGGAGGTTTCGGAGGTTTTCAAGGGTGAAATTGTGGAGGCGTGTGATTTGGATATGAGTTCGTACGAGGATCTACCCAAAGGCGGTGGGGAATGTAATGGGGTTTCGCATGAGGGTGGAGAAGGCGTTGTCGGAAATGGAAAGGGTGATTCCGAATGTTCTTATGTGTTTGTTAGCGGGAGCGACGTGGTCTCTGATGACTACGCTGAAAAGGAACTCTATGTGGAGTCTCTTCGGGAACTCGACCAACCCAAGGATGAGAAAGAGGTCCAAGTTGGGGAATTGAGTATTCAGAATGAGGAAAATCAATTGCACGAGGCAGATTGTTGCGTTGTTGAGGGAACTGTTGTTTCCTCTTCAAACGACGGTGTGCAGGTTGAATCAACCGGTGGACTGGTCCCGGAGGGTGATTTGCTTCAGGAGCCCAATGCGGAAGTGGACGTGGAATCTGAACCACAGAAGCTTAATGGTGTAGTGAAGATGGAGGAGCAAACTAGTTTGGAGTCTGATACAGAGCAAACTAGTTTGGAGTCCGGTGTGGAGCAAACTAGTTTGGAGTCCGGTGCGGAGCAAACTAGTTTGGAATCTGGTGCGGAGCAAACTAGTTTGGAATCGGGTGCGGAGCAAACTAGTTTGGAGTCTGGTGCGGAGCAAACTAGTTTGGAATCTGGTGCGGAGCAAACTAGTTTGGAATCGGGTGCGGAGCAAACTAGTTTGGAGTCTGGTGCGGAGCAAACTAGTTTGGAGTCTGGTGCCGAGAAAACTATTCTGGAGTCTGGTTCAGAGAAAACTATTCTGGAGTCTGGTTCAGAGAAAACTATTCTGGAGTCTGGTTCAGAGAAAACTGATCCAGAGTCTACTAAGATAGCACTGGAGAAACCACAATCTCAAATTGTGGTTCCAGTCGCTGTTGGATGTGAATTGATGCATTTAGATAATGGGAATCCAACAGTTGATGGACATATCAATTTCAAGCCTTCTGAGGAGATAGCTGGAAGTCAGGAATTTCTAGTTCCAATTTTGGAGACCACTGAATTCAAATTGCCTCTAACTGAGCTTAGAGAAGAGAAGGATGAGGGGCAAAATAATTTAGAATCAATACCAGAAGTCACAGACAATCAGGGATTTGAAGTTGTGATTTCAAACTCAGATGAATGTGACCTGCATCAGCTCAATAACGTACAGGAGAAAGTTCAGGATGAAAGTGAGACTGTTCCAGAAACAGTCTCAAATGAAAATCAAGAATCTGAAATTAAGGTTTCTGAAGACCTTCCATTTGATAAGGATCAGGAAAAGCAAACATCAGAATTGGAGAATGACCTTCCTTCTGAACATCCTCCAGTGGACCTTGGGGTGAACTTGGAGCTGAATTTGAAAATGCCTACTGCTGAAACCAATATGCAAAAGGAGGCAGAAGTTGCTGTTGGGTCTGTACCAGATGAAAATGGAGATGGATCGCCTATGGAATGTAGTCCTTCAGAAACAGAAGTTGCTAATGATTCGGTTGATGGCAATCAAACCACACCTGAGCTTTATGTATCTTCTGAAAATGACAAAAGCTTGTCTTCCTACAGTGACTGTGTGAGATCAGAAAGCACAGTTGGGTATGTACCTGTTGAAAATGCTGTAAGCTTGCCTACTGGTCTTGATAATGGTCCAGTAGTAGAACAAGAAGAAAATGGGGCTTCTCTAATTACTGAAGATTTCCCAACTTGTGCTGCAGATGGTGCAAGACAGGACACTAAAGTTGAAATTTTTGACCCAATCAACGGTGCAAATGTTGTCTCCTGTCCAGATGATGGTACAAAGTCAGAAAGTGAAGCTGAGAATGGCCCTAATGAAGATGATACAAGGTTAGCTTGCTCTGGTAATGATGTGAGACCTGAAACTATCATCAGTTTTGGTTCTATTAAATTCCCATGTGGTGATGGAAATGTAGAACACCATGCTTCAAAAGCGGCCCCTAAATGTTCAAGCTGTGAGCCTGGTGATGTTGATGATCTGGTGCTTATGGCATCTGATTTGAAGGATTCAGTTGAAAATCGAAGTAACTTGCCTACAAATGCCGTTGCTGAGATGAAATCAGAATCTGAAGTTGAAAAAATGTCTGCTGGAAGCAACAAAGACCTTGTATCTGAACCCAAGGTTCTGAATGACTCTGTTGTTAACAGTGAAAGTGTAATAAACAGTGTTGCACATGCTGTGGATGTTAAAATTGAAGGAGATCAAATCAGTACCAAAGACATTGATGTTGGAAATGAGGGAGATCAAATTACTTCTGTAGACAGTGATGATAAATTGACATGTCAAGAAGCTAGGAGTGTTTTAGGTAATGGAACCTCTTCTTCTCTAGAGTTTTTGAGTACTGATGCTTTGGATTCACAGAATGTACCTGTTGAGGTTGGAAAAAGGCCATTCTACTTCTTGATTAGGGTACCAAGGTATGATGATGAAAAAGTCAGGGAAGAGATCAAACTTGCACAGCTACAAGTTGATGAGAAGACCAAAAGTAGGGATGCAATTCGTTCGGAAATTCAAATAAAAAGGGCAGTTTGTAAAGAGTATAGTGAAAAATTTGAAGCTGCACTATCAGAAGAGAGAGCTGCCCGAGATTTGCTCAAGTCAAAATTTCAGGAAATGGATTCAGTTCAGTCTGTGATTAACAGAGTGAAAAATGCAATGTCTGTCAAGGATATTGATGGCAGGATACGCCACATGGAACATGCCATAGAACATGAAACCCTTCCTTTGAAAGAAGAGAAGCAGTTAATTCGTGACATCAAGCAGTTGAGGAATGTTCGTGAACAGCTGTCCTCTAATATGGGTAGGCAGGAGGAAGTCCAACAGGCCTTAGACCAAAAATCCCAAGTCGAGGAGCAGTCAAAGATTTTGAGGGAGGAAGTGGATTCACTCAAATACAAGGTTCAGAAAGCTGAAGTGATCACAAAAGCTGCTAAGAAGAAGTATTATGATGAAAATGAAAAGTTGAATGAGTTGCAAGCTCGATTTAAAGCCGCAGATGATATTCGTCAAGAAGCATACACACATTTGCAGAGTTTGAGGAAAAAATTGTCCGAGAAGAACAAATACTTTAGGATGTACAAGGATAATTTGAAAGCAGCCAATGATTATGCATCAGCTGGGGATAAAGAGGCACTTCAACGGCTTTGTGTTAATGAGGTGGAGACAATTATGGAACTATGGAACAACAATGACGAGTTCCGGAAAGAATACGTCAGATGCAACACAAGGAGTACACTCAGGAGACTGAGGACTTTGGATGGACGCTCTCTTGGCCCTGACGAGGAGCCGCCTGTGATACCCAATTTTTTAAATGAAAGAATTGGCAGGTCACTTTTTGCCCCGACCAAGGATAGCTCTGTGCTAATAGTCTCGACTGTGGAACGAGAAAAACAAATGGTACCTGCTACAGCTGAGAGTGCAGATGATAAATCCGTGGTGAATGTGACCAATCAAAAGAATCGGACAGCAAAAAATAAAAACCCCACTAAATCTGCTACTGGAGCTGTCTCAGCAACCATTTCTGGAAGGGATGAGATCGAAGAGACTAAAGAAGAGCATAAGCAGACAAAGGAGGAAGAGGAATTGGCCAGGAAGGCAGAGGAATTGAGAAAGGAAGAGGAAGCAGCTAAGTTGAAGGAGCAACGACGGTTGGAGGAGAAAGCCAAAGCTAAGGAGGCACTGGAAAGGAAAAAACGAAATGCAGAAAAGGCCCAAGCCAGAGCTGAGTTAAGAGCGCAGAAGGAAGCCGAACAGAAACAGAGAGAAAGGGAGAAGAAGGCCCGGAAAAAAGAAAGAAGGAAATCATCCTCTGCAGAGGGTACTGAGGGTTGCAATGAAGCAGAATCTGCGCCAAGCTCAGAAACCTCATTTGAAACTACCCTGGATTCTGAAATCATTGAGAAGCCTAGGGCAATAACAAAGAAGCCTCACAAATCATCACAATTTACAAAGCAACCCAAGTCAAAATCCATACCTCCACCCCTTCGCAGCAGGGGCAAGAGACGGATTCAGTCATGGATGTGGGTCGTTCTAATAGCCCTGCTTGTTCTTGCATTGTTCTTGTTGGGCAACAGTGGCTTCTCTTACGGCCTTGGGCTGCGAAACTTTGGCTTCTAA 4152 0.4342 MTAETEVSEVFKGEIVEACDLDMSSYEDLPKGGGECNGVSHEGGEGVVGNGKGDSECSYVFVSGSDVVSDDYAEKELYVESLRELDQPKDEKEVQVGELSIQNEENQLHEADCCVVEGTVVSSSNDGVQVESTGGLVPEGDLLQEPNAEVDVESEPQKLNGVVKMEEQTSLESDTEQTSLESGVEQTSLESGAEQTSLESGAEQTSLESGAEQTSLESGAEQTSLESGAEQTSLESGAEQTSLESGAEQTSLESGAEKTILESGSEKTILESGSEKTILESGSEKTDPESTKIALEKPQSQIVVPVAVGCELMHLDNGNPTVDGHINFKPSEEIAGSQEFLVPILETTEFKLPLTELREEKDEGQNNLESIPEVTDNQGFEVVISNSDECDLHQLNNVQEKVQDESETVPETVSNENQESEIKVSEDLPFDKDQEKQTSELENDLPSEHPPVDLGVNLELNLKMPTAETNMQKEAEVAVGSVPDENGDGSPMECSPSETEVANDSVDGNQTTPELYVSSENDKSLSSYSDCVRSESTVGYVPVENAVSLPTGLDNGPVVEQEENGASLITEDFPTCAADGARQDTKVEIFDPINGANVVSCPDDGTKSESEAENGPNEDDTRLACSGNDVRPETIISFGSIKFPCGDGNVEHHASKAAPKCSSCEPGDVDDLVLMASDLKDSVENRSNLPTNAVAEMKSESEVEKMSAGSNKDLVSEPKVLNDSVVNSESVINSVAHAVDVKIEGDQISTKDIDVGNEGDQITSVDSDDKLTCQEARSVLGNGTSSSLEFLSTDALDSQNVPVEVGKRPFYFLIRVPRYDDEKVREEIKLAQLQVDEKTKSRDAIRSEIQIKRAVCKEYSEKFEAALSEERAARDLLKSKFQEMDSVQSVINRVKNAMSVKDIDGRIRHMEHAIEHETLPLKEEKQLIRDIKQLRNVREQLSSNMGRQEEVQQALDQKSQVEEQSKILREEVDSLKYKVQKAEVITKAAKKKYYDENEKLNELQARFKAADDIRQEAYTHLQSLRKKLSEKNKYFRMYKDNLKAANDYASAGDKEALQRLCVNEVETIMELWNNNDEFRKEYVRCNTRSTLRRLRTLDGRSLGPDEEPPVIPNFLNERIGRSLFAPTKDSSVLIVSTVEREKQMVPATAESADDKSVVNVTNQKNRTAKNKNPTKSATGAVSATISGRDEIEETKEEHKQTKEEEELARKAEELRKEEEAAKLKEQRRLEEKAKAKEALERKKRNAEKAQARAELRAQKEAEQKQREREKKARKKERRKSSSAEGTEGCNEAESAPSSETSFETTLDSEIIEKPRAITKKPHKSSQFTKQPKSKSIPPPLRSRGKRRIQSWMWVVLIALLVLALFLLGNSGFSYGLGLRNFGF* 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0028 1383 Gene3D - 146 304 IPR047002 -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 492 511 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 1145 1342 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 1188 1269 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 420 447 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 278 292 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 1285 1305 - -
Vvi18g0028 1383 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 402 1360 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 166 292 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 1154 1183 - -
Vvi18g0028 1383 Coils Coil 1188 1279 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 401 452 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 600 625 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 166 258 - -
Vvi18g0028 1383 Coils Coil 924 978 - -
Vvi18g0028 1383 MobiDBLite consensus disorder prediction 482 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0028 Vvi-Chr18 368816 375109 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0028 - - vvi:100261635 2452.94