Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0024 ATGGATAGTTGTAACATTAGTGCATGTGACCTATTGATGAGGGTGATCTACTGGCATCCTCTTTTTGGATGGCCTTCAGATACTGACAACTTTTACAAGCATAAATATTCTTTGCTTAGTCTGGGGCTTGGAAGGGGAGGACTGAACCATAATACGAGCAACAAGGCCATGAAGAAGTCAAGCACATTTCTCCCGCAGAGATCTAATTCAATGGAATTCCCAAACTTTCCTCGCTCAACATCACTTGTCCTAAACAAGTCTCCTTCAGTTGAATACCCAAGCTCTGTCAATCCAACTCAGGGAGAGCCGATGCTTCTTTCCTGTCATCCTCACCCCCTGGCTCAGGTCACCTCACCTGAACCCTTCATATGCATGGGCTGCAAGGAATATGGAGCAGGCACAAGGTTCACATGCCAACAGTGTAACAATCAACTACATGAGTTCTGTGCCTTGGCTCCTACAACTCTCAAGAGTCATCCTCTCCACCGCCTACACCCACTGGAATTCTGTTCTAAGCCAGTTAAAGGCGGAATTTTAGGGACCAAGTGTGATATTTGCAGCAAGCCAACGGCAGGGTATACTTTCCGTTGCAGTGCATGTAGTTTCCAGATTCACCCTTGCTGCGCTATGCTTTCTACTGAAATGACCTTTGTGGTCCATCCCCACCCCCTAACCCTGATGCCTGCAATGGCATTATCAAGTGGTGACCCTGGTTTCAGCTGTGGTGAGTGCAAAAGAAAGAGGTCAGGGCGGGTGTTTCATTGCACAGCCCCATCATGTGATTATCATCTCCATGCAGTTTGTGCTAAGAACATGGTTAATGGGTTGCGTGCAAGTGGCATCATGAGCTTAGAAAAGCCTAGCATGCTGGGGACTGCCGCAAAGATTGCATCTCAGGTCGTTATAGAGTTCATTGGAGGACTGATTGAGGGGCTTGGACAAGGTGTTGGGGATGTCCTGGTTCAAACTATTGCAAGAGGGCGGTGCACTACTAGACGAAGATTGGAATGA 1011 0.4758 MDSCNISACDLLMRVIYWHPLFGWPSDTDNFYKHKYSLLSLGLGRGGLNHNTSNKAMKKSSTFLPQRSNSMEFPNFPRSTSLVLNKSPSVEYPSSVNPTQGEPMLLSCHPHPLAQVTSPEPFICMGCKEYGAGTRFTCQQCNNQLHEFCALAPTTLKSHPLHRLHPLEFCSKPVKGGILGTKCDICSKPTAGYTFRCSACSFQIHPCCAMLSTEMTFVVHPHPLTLMPAMALSSGDPGFSCGECKRKRSGRVFHCTAPSCDYHLHAVCAKNMVNGLRASGIMSLEKPSMLGTAAKIASQVVIEFIGGLIEGLGQGVGDVLVQTIARGRCTTRRRLE* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0024 336 PANTHER DIACYLGLYCEROL KINASE THETA-LIKE-RELATED 107 323 - -
Vvi18g0024 336 Pfam C1 domain 160 209 IPR004146 -
Vvi18g0024 336 Pfam C1 domain 108 150 IPR004146 -
Vvi18g0024 336 Pfam C1 domain 220 269 IPR004146 -
Vvi18g0024 336 SUPERFAMILY Cysteine-rich domain 127 222 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0024 Vvi-Chr18 331246 332444 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0024 - - vvi:100252968 677.552