Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0023 ATGAGGAAAGACGCCTCACCGGCTACCGTCCCCGGCAACTCCGTCGGCAAATTATTCCTATGTTTCGAAACTAAGCCCCTGGTTGCCACATTACTGGCCCTCACCCTTGTCATGGTCATCTGGAATCTCCAGCCCTACTACGAAAACCTCATCTCCACCACCAGCCGCTGTTCCGCCACCGCCGCCGCCGCCACCGCCACCTCCACCACCATCGCCACCGGTAATGCATCCATCCTCCCGTATACACCGCCCTCATCCTCCTCCGTCTCTGAAAAAAAGGTCTCCACTCCAAAGGCCAGCTCCAACGCAGACCCTAACAAGCGCCTCTTCTACGCCTACGGCAACGCGGCCTCTCTCTTCGTGTTAATGGGAGCTTACCGCGGCGGTCCTCGGACATTCGCTGTTGTGGGTCTGGCTTCCAAGCCTCTTCACGTCTACGGCCGTCCTTGGTACAAATGCGAGTGGATCTCTAGCAATGGTTCAGCTTCCTTGAGGGCCAAAGCCTACAAAATGCTTCCCGATTGGGGCTACGGTCGGGTGTACACGGTGGTTGTGGTGAACTGCACATTCGCTGAAAACCCAAACGAGGACAACGCTGGTGGGAAGCTTGTCCTCCGTGCCTACTATGGCGAGTCGCCGAGGAAATTCGAGAAGTTCACGGTCTTGGAGGAACAACCAGGGTCCTACAATGAGTCCAATTACCGCCCGCCGTATCAATATGAGTATCTGTACTGCGGGTCATCTTTGTACGGAAGCCTGAGCGCGGCGAGGATACGGGAGTGGATGGCGTATCATGCGTGGTTCTTCGGACCCAAATCACATTTTGTGTTTCACGATGCGGGTGGGGTGTCGCCGGCGGTGAGGGCAGCGCTGGAGCCCTGGGTGCGAGCTGGGTGGGCTACGATTCAAGATATCAGAGGCCAGGCGGAGTTCGACGGCTATTACTACAACCAATTTTTGGTGGTGAACGACTGTCTCCATCGTTACCGACACGCTGCCAACTGGACATTCTACTTCGACGTGGATGAGTATATATACTTGCCTGACGGCAGGACTCTGGAGTCCGTTATGGAGGAATTCTCCGATTATACCCAGTTCACCATTGAGCAGAATCCAATGTCCAGTGTGCTTTGCTTGAACGACTCCTCCCGCAACTATTCAAGGGAATGGGGATTCGAGAAGCTGCTGTTCAGAGATTCACGAACCAGAATCCGGCGAGATAGAAAGTACGCAATACAGGCGAAGAACGCATACTCCACGGGAGTACACATGTCTGAGAATGTAATTGGGAAGACACTACACAAGACCGAAACCAAGATCCGATACTATCACTACCACAATTCCATATCAGTACAGGGTGAGCCTTGCCGTGAATTCCTCCCTATCTCCGCCAAGAACAATGTCACCTGGTTCGATAAGCTCCCTTACGTTTATGACGACAACATGACGAAGCTGGCCAACACCATCAAACAATTCGAGCGCAATACCATCGGATCCATACATGTGTTTCAATACCTCACCGACATGGGCATCCAGGCAGAGGAGGTGAACACTGGGCATTGGTAG 1566 0.5358 MRKDASPATVPGNSVGKLFLCFETKPLVATLLALTLVMVIWNLQPYYENLISTTSRCSATAAAATATSTTIATGNASILPYTPPSSSSVSEKKVSTPKASSNADPNKRLFYAYGNAASLFVLMGAYRGGPRTFAVVGLASKPLHVYGRPWYKCEWISSNGSASLRAKAYKMLPDWGYGRVYTVVVVNCTFAENPNEDNAGGKLVLRAYYGESPRKFEKFTVLEEQPGSYNESNYRPPYQYEYLYCGSSLYGSLSAARIREWMAYHAWFFGPKSHFVFHDAGGVSPAVRAALEPWVRAGWATIQDIRGQAEFDGYYYNQFLVVNDCLHRYRHAANWTFYFDVDEYIYLPDGRTLESVMEEFSDYTQFTIEQNPMSSVLCLNDSSRNYSREWGFEKLLFRDSRTRIRRDRKYAIQAKNAYSTGVHMSENVIGKTLHKTETKIRYYHYHNSISVQGEPCREFLPISAKNNVTWFDKLPYVYDDNMTKLANTIKQFERNTIGSIHVFQYLTDMGIQAEEVNTGHW* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0023 521 PANTHER UNCHARACTERIZED 31 494 - -
Vvi18g0023 521 MobiDBLite consensus disorder prediction 83 102 - -
Vvi18g0023 521 Pfam Glycosyltransferase family 92 241 461 IPR008166 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0023 Vvi-Chr18 325367 327296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0023 K23869 - vvi:100247851 1002.28