Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0019 ATGCTAAACATGTCACCGACAACCCCTTACCACTTCACTTCCATTGGACAATTGGAGAGAACACTATCTCTCCAGTCTTCACTATGTTGGGATTCTAAGAAGGCTCCTTCTTCTCTCTCCAATGCATCCATTCCTTCAAATGGAGCTCCAACACCAAAGTCTCCTGCCCAGCTGATTGATGAGATTGCCACACTTGAGGTTGAAATTATGCATTTGGAGCGATATCTTCTTTCACTCTATCGTTCAGCTTTTGAGCAGCATCTACCCACATTTCCAGGAAATTCTGAGCATTTACAACATAAGGCGGGATCACCGTTGCAAGTTTTACAAAGTCAACCATCTTACAAAATAGAGCCTGAAATGTGGAGAGGTGGTGTGGTCCATAGTGGAACTTCTTCCACACATGGTTGGGCTGATTCAGATGATTGGAATTATGCAGCAACTTCAAAAGTAAAATCTAGAAGGGATGGAAAGAATGGTGATCTTGGTCATCACAGCCTCGGAGAGTATTTTGGTGCTTCCCACATTGATCACACACTCCATACACCAGATAAACTTTCTGAAGACATTGTCCAATGCATATCTTCTATCTACTGCAAACTTGCCAACCCCCATTCAAGTAGTGCGGGCTTTTCAGTTTCTTCTACCTCGTCCTTGTCCTCCACAAGTACATTCTCTGTCCAGAATCTCTTTGATACTTGGAGTCCACATTGCAATGAGGGAGCTACAGGGCACCATCGATTTCAAGGTTTGAAGGAGGAAAATGCACCATATGCTGCAATGGTAGAAGTAATGAAGTTATGCCTAGATGATGATAGTTTCAACTATGCTGCTAGCATGCTGCAAAATTTCAGGTCATTGGTTCAAAATCTTGCGAAGGTTAACCCAAGGAAGATGAAGCGTGAAGGAAAACTAGCATTTTGGATCAACATCCATAATGCCTTGGTGATGCATGCGTATTTAGCTTATGGAATCCGTAATTGTGTAAAAGGCACATCTATTTTAAAGGCAGCTTACAATGTCGGGGGACATTGTGTAAATGCTTATGACATACAAAGCTCCATTTTAGGGATTCGGTCACACAGGCCAGCACCGTGGCTACAAACACTGCTTTCTCCAGGAAATAAGTCCAGGATGGGGAACAGCAAACATATATACGCCATTGAATACCCAGAACCGCTTGTTCATTTTGCCCTTTGTTCAGGGACATACTCCGACCCTGTGGTATGA 1230 0.4317 MLNMSPTTPYHFTSIGQLERTLSLQSSLCWDSKKAPSSLSNASIPSNGAPTPKSPAQLIDEIATLEVEIMHLERYLLSLYRSAFEQHLPTFPGNSEHLQHKAGSPLQVLQSQPSYKIEPEMWRGGVVHSGTSSTHGWADSDDWNYAATSKVKSRRDGKNGDLGHHSLGEYFGASHIDHTLHTPDKLSEDIVQCISSIYCKLANPHSSSAGFSVSSTSSLSSTSTFSVQNLFDTWSPHCNEGATGHHRFQGLKEENAPYAAMVEVMKLCLDDDSFNYAASMLQNFRSLVQNLAKVNPRKMKREGKLAFWINIHNALVMHAYLAYGIRNCVKGTSILKAAYNVGGHCVNAYDIQSSILGIRSHRPAPWLQTLLSPGNKSRMGNSKHIYAIEYPEPLVHFALCSGTYSDPVV* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0019 409 Pfam Leucine-zipper of ternary complex factor MIP1 17 86 IPR025757 -
Vvi18g0019 409 Pfam Protein of unknown function, DUF547 296 409 IPR006869 -
Vvi18g0019 409 PANTHER UNCHARACTERIZED 15 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0019 Vvi-Chr18 299572 304462 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0019 - - vvi:100264995 820.076