Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0013 ATGAATGAAAGAAGATGTGTTGCACGCCCCATTAAAAGTGCGGGAGCATTTCTGGTATTGGCGTTGGCCCTTGCAGTGGTAGCCCTAATTCGACCCAGCGCTTGGAAATTGGGGCTAATTATAACGTATAAGTTCAAGGAGGAAGTACCCATGCAAGCCTCACTGCTGAGCTTGGGTGCAAAACCACCACTAACATCGCATCAGATCCGTGTGAAATCGCTCTACACTCCCACCTCCTTCAACGATCCTACAGATTCTACCTCCATGGCTGCTATTCCTGCTCCCAAGTGGGCCCAGAAGACCATCACTCTTCCTCCTCAGAGGCGAGGCTGTCACCACATCACCCCTAAGATATTGAAGGAAATTGGGCAAGACCTGTCAGGATTCAAATGTGGCCTTGCTCATCTATTCATTCAGCACACAAGTGCTTCTCTGACTATAAATGAAAATTACGACTCGGACGTTCGAGATGACACTGAGACATTCCTCAGCAAAATAGTTCCAGAGGGAAGATCTGCACCTTGGAAGCATACACTGGAAGGTCCGGATGACATGCCAGCACACATCAAATCTTCAATGTTTGGTTGCAGTCTCACGATTCCAATTACTGATGGACAGCTAAACATGGGAACTTGGCAGGCTGGAAGAAACTATTATGTAGCCATAAGAGCTACAATGAAAATTCCCAATGGAGAACATGCTTAA 705 0.4681 MNERRCVARPIKSAGAFLVLALALAVVALIRPSAWKLGLIITYKFKEEVPMQASLLSLGAKPPLTSHQIRVKSLYTPTSFNDPTDSTSMAAIPAPKWAQKTITLPPQRRGCHHITPKILKEIGQDLSGFKCGLAHLFIQHTSASLTINENYDSDVRDDTETFLSKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSLTIPITDGQLNMGTWQAGRNYYVAIRATMKIPNGEHA* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0013 234 NCBIfam secondary thiamine-phosphate synthase enzyme YjbQ 100 214 IPR001602 -
Vvi18g0013 234 Gene3D - 89 221 IPR035917 -
Vvi18g0013 234 Pfam Uncharacterised protein family UPF0047 114 213 IPR001602 -
Vvi18g0013 234 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 88 214 IPR001602 -
Vvi18g0013 234 SUPERFAMILY YjbQ-like 97 213 IPR035917 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0013 - - vvi:100252976 419.468