Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0011 ATGGCGGGCTCGGCGTCTGTGATGGGTTGCGTGGTAGTGGGTCCTCCTCAACCCCGATGGTCCAGTTTCAGAGAGGACTCTCATCGGAGGACTCCAGCCTCTCGTCGCTCAAATCTCATCATCCTTCGCCCTTCTCCTTCTTCATGTTCCCTCGCTTGCCCTACTTCCACTACTTTTCAATCCCTCATTTCTTCCCGACCTCCGTGGCTACGTGAAGTTGGAAATGGAGGATCAAGATCTTTGAAGAAAAAGAGTAGTTATTGGAATCATTATACTTCCAATGAGCACGTGGCTGAAGCACCTTTATCAAAACAACATAAGTGCATCTCCTGCTTCCTTAACCATCCCCGAAGTTGTTCCAGTATTAAAAGATTTGTGCCAAGAGTCTTCTCTGATAAATCTACATTTCCTTTGTTGAAGCACACCCTTGACAATGTCTCTGTGAAAAGAGTTCGTGTTCTGAATGCGACTGTGGGTCCAGATGAGCCACATGCAGCGAGTACAGCCTGGCCAGATGGCATTCTAGAAAAGCAAGGTCTGGATTTAGTGGATCCTGAAATAGGAAGAGCAGAATTAGAGGGATTTTTATGTTCTGAACTTCCATCTCACCCAAAACTTTATCGAGGACAATTGAAAAATGGATTGCGGTACCTTATTTTACCTAATAAAGTTCCACCAAACAGGTTTGAAGCACACATGGAAGTTCATGTGGGGTCAATTGATGAGGAAGATGATGAGCAAGGCATTGCACATATGATTGAACATGTTGCATTTCTTGGAAGTAAGAAGCGTGAGAAACTTCTTGGGACAGGGGCCCGGTCTAATGCTTATACAGATTTCCATCATACAGTGTTTCACATCCATTCACCAACTAGTACCAAGGACTCTGATGGAGATTTACTACCATTTGTACTCGATGCTTTGAATGAGATTGCTTTCCACCCAAAATTCCTTGCTTCTCGAGTGGAAAAAGAAAGGCGGGCAATACTTTCAGAACTACAGATGATGAACACAATAGAATACCGAGTTGACTGCCAGTTATTACAACATTTGCATTCTGAAAACAAGCTCAGTAAAAGGTTTCCAATTGGACTAGAAGAGCAGATTAAGAAGTGGGATGCAGATAAAATCAGGAAATTCCATGAGCGTTGGTACTTCCCTGCAAATGCAACCTTGTACATTGTGGGGGATATTGATAACATTTCAAAGACAGTTTACCAGATTGAAGCCATCTTTGGACAAACTGGAATGGAAAATGAAACAGCTGCAGCGCCTACTCCCAGTGCATTTGGTGCAATGGCTAGTTTTCTTGTTCCCAAACTCTCAGTTGGACTGGCTGGAAGTTTGTCTCATGATAGGTCACCGATTCCTGTAGATCAATCTAAATTTACTAAAAAGGAAAGACATGCGGTTCGTCCTCCTGTCAAGCACAATTGGTCTCTTCCTGGAAGCAATGAGGATATGAAGTCTCCGCAGATATTTCAGCATGAGTTGCTTCAGAATTTCTCAATTAATATGTTCTGCAAGATTCCTGTCAACAAGGTTCAGACATATGGTGACTTGCGAAATGTTCTGATGAAGAGAATATTCCTTTCCGCTTTGCATTTCCGGATTAATACAAGATACAAGAGTTCCAATCCTCCATTCACCTCAATTGAGTTGGATCATAGTGATTCTGGAAGGGAAGGATGCACTGTCACTACTCTTACAGTAACTGCAGAACCCAAGAACTGGCAAAGTGCAATTAAAGTTGCTGTTCAAGAGGTTCGAAGGCTTAAAGAGTTTGGTGTCACAAAAGGTGAATTAGCTCGCTATTTGGACGCTCTACTAAAAGATAGTGAACAGTTGGCGGCCATGATTGATAATGTGTCATCAGTGGATAATTTGGACTTTATTATGGAGAGTGATGCACTGGGCCACATGGTGATGGATCAGAGACAGGGACATGAGAGTTTGGTTGCTGTTGCTGGAACAGTTACCCTTGAAGAAGTCAATTCTACTGGTGCTAAGGTGCTAGAATTCATCTCTGATTTTGGAAAACCTACTGCACCTCTTCCTGCTGCTATTGTCGCCTGTGTTCCAACAAAAGTGCATGTTGAGGGTAGTGGTGAAATTGAGTTCAAGATATCTCCAATTGAGATCACAGATGCCATAAAAGCAGGTTTGGAGGAACCCATTGAGGCTGAGCCAGAGCTTGAGGTACCAAAAGAACTGATATCTTCATCACAGCTACAGAAATTAAGGGTAGAGCGAAGTCCGTCTTTTATTCCTCTATCTCCAGAAGTAAATGTCACAAAAGTGTATGACAATGAAACAGGAATCACTCAGCTCCGTCTTTCAAATGGAATTCCTGTAAACTACAAGATATCAAGAAATGAAGCTCGAGGGGGTGTAATGCGGCTTATAGTTGGTGGTGGCCGAGCGGCAGAAAGCTTTGAGTCAAGGGGGGCTGTTGTTGTAGGTGTTCGGACCCTTAGTGAGGGCGGTCGTGTTGGCAACTTTTCCAGAGAGCAGGTTGAACTTTTCTGTGTGAATCACCTGATAAATTGCTCTTTGGAGTCCACTGAAGAATTTATTTGTATGGAATTCCGTTTTACTCTAAGAGACAATGGGATGCGTGCAGCTTTCCAGCTACTCCATATGGTGCTTGAGCATAGTGTATGGCTGGATGATGCATTTGATAGAGCAAGGCAATTATATTTGTCATATTACCGGTCCATTCCCAAAAGCTTAGAACGATCCACGGCTCACAAGCTCATGTTAGCAATGTTGAATGGAGATGAGCGATTTGTTGAACCTAGTCCAAAATCATTACAGAATCTGACATTGCAGTCAGTAAAGGATGCAGTGATGAATCAGTTTGTTGGTGATAACATGGAGGTAAGTGTGGTTGGGGACTTCTCAGAGGAGGATATCGAATCTTGTATTCTTGATTACATGGGGACAGTTAGAGCATCAAGAGATTCTGAGATAGAGCAACAATCTAGCTCAATCATGTTTCGGTCATATCCATCTGATTTGCAGTTTCAACAAGTCTTCTTGAAGGATACTGATGAAAGAGCATGTGCATATATTGCTGGCCCTGCACCCAACCGTTGGGGTTTCACCATTGAAGGAAAAGACCTTTTTGAGTCTATCAATAATATCTCAGTTGATGATGATGAAGAGCCACAATCTGAGTCACTCTCAGAGATGAAGGATTGCAGAAAGGATCTTCAAAGAAAACTCCGCAATCATCCACTTTTCTTTGGCATCACAATGGGGCTGTTGGCCGAGATCATAAACTCTAGGCTATTTACAACAGTCAGGGATTCTCTTGGATTGACATATGATGTATCTTTTGAGTTAAGTCTCTTTGATAGGCTTAAGCTTGGGTGGTATGTGATATCCGTAACATCAACTCCAGGCAAGGTATATAAAGCTGTTGATGCTTGCAAGAACGTCCTTAGAGGTTTGCATAGCAGCAAGATTGCCCAAAGGGAGTTAGACAGGGCAAAACGGACCCTGCTGATGAGACATGAAGCTGAAACCAAGGCAAACGCCTATTGGCTGGGATTGTTGGCTCATTTACAAGCTTCCACTGTTCCAAGGAAGGACATATCATGCATTAAAGATCTCACGTCGCTTTATGAAGCTGCCACTATTGAGGACATATACCTTGCATATGAACAGTTGAAGGTAGATGAAAATTCCTTGTATTCATGTATTGGTATTGCGGGGGCTCAGGCTGCTGAAGAAATTTCTGTAGAAGAGGAAGAGTCAGATGAAGGCCTACAGGGAGTCATTCCTGCAGGGCGTGGTTTATCTACGATGACACGGCCAACAACATGA 3831 0.4304 MAGSASVMGCVVVGPPQPRWSSFREDSHRRTPASRRSNLIILRPSPSSCSLACPTSTTFQSLISSRPPWLREVGNGGSRSLKKKSSYWNHYTSNEHVAEAPLSKQHKCISCFLNHPRSCSSIKRFVPRVFSDKSTFPLLKHTLDNVSVKRVRVLNATVGPDEPHAASTAWPDGILEKQGLDLVDPEIGRAELEGFLCSELPSHPKLYRGQLKNGLRYLILPNKVPPNRFEAHMEVHVGSIDEEDDEQGIAHMIEHVAFLGSKKREKLLGTGARSNAYTDFHHTVFHIHSPTSTKDSDGDLLPFVLDALNEIAFHPKFLASRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNISKTVYQIEAIFGQTGMENETAAAPTPSAFGAMASFLVPKLSVGLAGSLSHDRSPIPVDQSKFTKKERHAVRPPVKHNWSLPGSNEDMKSPQIFQHELLQNFSINMFCKIPVNKVQTYGDLRNVLMKRIFLSALHFRINTRYKSSNPPFTSIELDHSDSGREGCTVTTLTVTAEPKNWQSAIKVAVQEVRRLKEFGVTKGELARYLDALLKDSEQLAAMIDNVSSVDNLDFIMESDALGHMVMDQRQGHESLVAVAGTVTLEEVNSTGAKVLEFISDFGKPTAPLPAAIVACVPTKVHVEGSGEIEFKISPIEITDAIKAGLEEPIEAEPELEVPKELISSSQLQKLRVERSPSFIPLSPEVNVTKVYDNETGITQLRLSNGIPVNYKISRNEARGGVMRLIVGGGRAAESFESRGAVVVGVRTLSEGGRVGNFSREQVELFCVNHLINCSLESTEEFICMEFRFTLRDNGMRAAFQLLHMVLEHSVWLDDAFDRARQLYLSYYRSIPKSLERSTAHKLMLAMLNGDERFVEPSPKSLQNLTLQSVKDAVMNQFVGDNMEVSVVGDFSEEDIESCILDYMGTVRASRDSEIEQQSSSIMFRSYPSDLQFQQVFLKDTDERACAYIAGPAPNRWGFTIEGKDLFESINNISVDDDEEPQSESLSEMKDCRKDLQRKLRNHPLFFGITMGLLAEIINSRLFTTVRDSLGLTYDVSFELSLFDRLKLGWYVISVTSTPGKVYKAVDACKNVLRGLHSSKIAQRELDRAKRTLLMRHEAETKANAYWLGLLAHLQASTVPRKDISCIKDLTSLYEAATIEDIYLAYEQLKVDENSLYSCIGIAGAQAAEEISVEEEESDEGLQGVIPAGRGLSTMTRPTT* 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0011 1276 Pfam Peptidase M16 inactive domain 940 1169 IPR007863 -
Vvi18g0011 1276 Pfam Peptidase M16 inactive domain 371 609 IPR007863 -
Vvi18g0011 1276 SUPERFAMILY LuxS/MPP-like metallohydrolase 203 412 IPR011249 GO:0046872
Vvi18g0011 1276 Pfam Insulinase (Peptidase family M16) 223 353 IPR011765 -
Vvi18g0011 1276 Gene3D - 1077 1232 - -
Vvi18g0011 1276 PANTHER NARDILYSIN 200 1231 - -
Vvi18g0011 1276 SUPERFAMILY LuxS/MPP-like metallohydrolase 763 985 IPR011249 GO:0046872
Vvi18g0011 1276 SUPERFAMILY LuxS/MPP-like metallohydrolase 1088 1231 IPR011249 GO:0046872
Vvi18g0011 1276 FunFam Stromal processing peptidase chloroplastic 488 673 - -
Vvi18g0011 1276 FunFam Stromal processing peptidase chloroplastic 776 987 - -
Vvi18g0011 1276 MobiDBLite consensus disorder prediction 1252 1276 - -
Vvi18g0011 1276 FunFam Stromal processing peptidase, chloroplastic 201 420 - -
Vvi18g0011 1276 Gene3D - 201 421 - -
Vvi18g0011 1276 Gene3D - 777 988 - -
Vvi18g0011 1276 Gene3D - 488 673 - -
Vvi18g0011 1276 FunFam Stromal processing peptidase, chloroplastic 1066 1232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0011 Vvi-Chr18 180008 216858 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0011 K25894 - vvi:100266746 2506.48