Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0010 ATGGGGTCGGAGCAAAACAGATTCCCGCAGCAGGAACGGGAGCGCGAACGGGAACGGCAGAAGAGATGGGGAGGATGTTGGGGTGGATTGTCTTGTTTTGGTACACAAAAAGGTGGAAAGCGTATTGTACCTGCATCTCGTATTCCAGAGGGCAATGCATCGGCAACCCAACCAAATGGACCTCAAGCAGTTGGGTTGACCAACCAGACCACTGCACTGGCACCATCTCTTCTAGCTCCTCCTTCTTCACCAGCATCCTTCACAAATTCTGCGCTTCCTTCAACAGCACAGTCACCCAGTTGTTTTTTGTCAATGTCTGCCAATTCACCTGAAGGTCCTTCATCCACAATGTTTGCAACTGGACCGTATGCCCATGAGACACAGCTGGTTTCTCCTCCTGTTTTCTCAACCTTCACAACTGAGCCATCTACTGCCCCTCTCACTCCCCCACCAGAGTTGGCTCATCTAACCACCCCCTCTTCCCCAGATGTTCCTTTTGCCCAGTTCCTTTCATCTTCCATGGATCTTAAAAGTGCTGGCAAGACAAATTACATTGCTGCCAATGATCTTCAAGCAACATATTCACTTTATCCTGGAAGCCCTGCCAGTAGTCTCATATCACCTATTTCAAGGACCTCAGGTGACTGTTTATCATCGTCTTTCCCTGAACGTGAGTTTCCCCCACGATGGGATCCTTCAATTTCTCCCCAAAATGCTAAATATCCAAGGAATGGATCTGGCAGGCTATTTGGGCTGGATACTGCTAGTTCCTCCATCTCGCAAGATTCAAATTTCTTCTGCCCTGCCACATTTGCTCAATTTTATTTGGATCATACTCAGCAGTCATATCCTCCATTTCCTTCTGGTGGGAGGCTAAGTCTTTCCAGGGAATCAGATGTTTACTCTAGTGGTGGAAATGGGCATCAGAATAGGCACAACAAGAATTGTAAGCAAGATGTGGAGGAAATAGAAGCTTATAGAGCATCCTTTGGGTTCAGCGCAGATGAAATTATCACCACTACTCAATATGTAGAGATTTCTGATGTATTGGAGGACTCATTTACCATGACACCTTTTACCTCTAATAAACCAGACATGGAAGAAAATGTAGTACCTGCAGTGGTACATGAAGGACCTAAAGATCAAACAAACTTGCTGAATGAGGAAAGCCTTAAATCAGAATCAGGTCTGGTGGATGAAGGGGGATGCTGTGAAGGGCTTCCCTCATGCAAAACCTTTGAAGATCATAAATCAGAGAGGCAATCTGGGAATGAGTCTGGATCAAGTACACCTGGTAAGCATATTCTGACTGATGAAGAGGAAATATTTCCCAAGGGGGCATCCAAAATTGGCAGGAAATATCATCTGGGTTTATCAAGCTCTGATGCAGAAATTGACTATAGGAGAGGGAGAAGCTTGAGAGAAGGCAAAGGAGATTTTGCGTGGCATGACTAG 1455 0.4577 MGSEQNRFPQQERERERERQKRWGGCWGGLSCFGTQKGGKRIVPASRIPEGNASATQPNGPQAVGLTNQTTALAPSLLAPPSSPASFTNSALPSTAQSPSCFLSMSANSPEGPSSTMFATGPYAHETQLVSPPVFSTFTTEPSTAPLTPPPELAHLTTPSSPDVPFAQFLSSSMDLKSAGKTNYIAANDLQATYSLYPGSPASSLISPISRTSGDCLSSSFPEREFPPRWDPSISPQNAKYPRNGSGRLFGLDTASSSISQDSNFFCPATFAQFYLDHTQQSYPPFPSGGRLSLSRESDVYSSGGNGHQNRHNKNCKQDVEEIEAYRASFGFSADEIITTTQYVEISDVLEDSFTMTPFTSNKPDMEENVVPAVVHEGPKDQTNLLNEESLKSESGLVDEGGCCEGLPSCKTFEDHKSERQSGNESGSSTPGKHILTDEEEIFPKGASKIGRKYHLGLSSSDAEIDYRRGRSLREGKGDFAWHD* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0010 484 MobiDBLite consensus disorder prediction 1 21 - -
Vvi18g0010 484 MobiDBLite consensus disorder prediction 218 239 - -
Vvi18g0010 484 MobiDBLite consensus disorder prediction 415 439 - -
Vvi18g0010 484 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 3 477 IPR040420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0010 Vvi-Chr18 170677 177316 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0010 - - vvi:100261549 949.118