Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0008 ATGGCGTTGGAGGCTGATGAAATGGATTCTCTGTTTGAGGGGATGATCCTGTTTAACCCTTCTCAAACCCTTGCAGACCAAGACGGCGTCGATGGTAACTGTGATCCAATCCCTCTAACTGATGCGTCTGCATCATTATCATCGTCCTCATCTCAGCCCCTTGACGAAAACCTCTTCTCAGATCTCACGCTTATCACTCCCAATCAATTCCGAAATCCACTCTTGGATCCCTCTCCAACTCCTATCTCAACGTCAACAACCAGGGAAGAAACCCCCTCGGTCTCCCGACAGATTTCCAGAAAGAAAAAGAGAGCCAGTTTAAGGATCGGATACGGTAGAGACAGCCTCAACCAGCTCTCCCTTGTTGACGATGCAGAAGTACAATCCTCTCCATCCGATGATTCTCATTCCCAAACCAAATCCTTTTCTTTGCTTCCCGATGAGACGCTGGATTCTCATCCATCACCACCAACAACATCTCAAGCTATCTTAGTTCGTGAGGATCATGATTTGGTCTTAGATGATGTGCAATTCAAGCCTTTCCCACAACAGAACGAACAGGAACAAATACAACTAGAGGAAGAAAAGACTACCTGTTCCACTTCCACTGAAGCCAACTTTGATCGAGTCAGGGCCATCATTTCTGAGAAGCTCCACCATGCTCGGCAATTGGCTGCTTCAATTTCTGCATCAAGGAAGGATTCCATGAGGAGGAGACGAAAAGCCGCTCAGAATCTAAATCTAGCATCCACAAAGTCCATGGAACTTGAGAAGGAGCTTGAGGAAGCATGCGAGGCTGAAGATTTTGAGATGGCAGAGAGGCTGAGCCAGAGCCTTGCTGGAGCAGAGAAGGACAAACAAGCTTTTATTGCCGCCCTGAGGGATGCAGAAGCCGAGTGTGATGCTATAGATTCAAAGATGCAGGAGGTTCTAGAGCGGCAGATTACAGCTGAGGAAGAATGCGTTTCTTTGCTGGAACAATTCGCAACGGATGCTGCTAACAATGCAAATGAAATCTCCAAGAGGGCACAGTTCCTGTCTTCAAAAGAAATGGACCAATGGTTTTCATCAACTGAAGCCTTGGAAGTCAGGAAGTTGGAATTAGAAATTGAATCGCATTTAATAAGTGACACACGCTTGTTATTGAATGATTCCATTGAGCATGCAGCTGAAGATGAAAGGAGAGAGAGAGAATTTCTTTGCAAGAGAAAAGATACGCTGATGGATGAGCTGGAGAAATTGCTTGCTTTGGTGAGAGAGAAGGAAGATGAGATTGCAGAAAATGATGCTAACATCAAAGCTGTTGATAAAAGAATAGCTGATGTTGTCTCTGGATTTCAAGAGATGCATTTAAGCATCAATATGAAATATGATAATTTGCAATCAAGCCTATCTCAGACGGAATTGGAGAGTGAAGCTTTATCAATGAAGAAAAAGGAAATTGATGACTTGCTTTCTGAGGAAGAAGAAAGGGGAGCAAAACTTAGGGAACTTGCTAGGATTTCTGCAGATGAAGCAAAAGCATATGAAGAAGTTGTTGGTCTAAGAAAGAGTTTTGCATTGTCCATTGTGAAGTCCAGGGAAGATAAACTGAGGCTTGCGAAGACTGAAGAAAAACTCTCTGAGGAAGTGCAAATTCTCAGACAGGAGGTTTCTGCCGCTAGAGCTTCTCTTCAGGAATTATCATCAACTAAGTCTAGCATTCAACAAGAAATAGCATCCTCCAAGCAAAGAATTTTCTTCATAGACAAAATAGTCCCTGAGCTGGAAGCAGAAAAGAAAGTTGCTGCAGCTGCAAGAAATTTCAAAGAAGCAGCAAGAGTAGCTGCTGAAGCAAAGAAATTAAGTGTTGAAAAAGAAGGTGAAGAGGTTAAAATGGATGGAGCCATGTTAGAGCTTGGGAAGCTTGAGGAAGAAATTAAAGACACTGTTAATTGGCTGGTGGAGGCTGATGAATTGATTTTGTTCAAGGAAAAAGAGGTGGCAATGGCTAGATTCCAGAGGTTGCTTTTAGTGGCTGGTGCTGCTAAAGCAGAAAGGTTGGCTGCTGTAGAGTTGGGGGACCTTGAAGAAGCTAATCTTCTACTTGCAGAGGCTGAAGCAGCAGAGGTCGAAGCAAAAAACCTTGAACAAAGTTACAATTTCAAGGAGGAAGAATTTGAAAATCTTCCTAAACACTTCATGTCCATGGAACTAGTATCAAACCTTGGTGGGAAACAGTTAGCGGAACTGGCAGCTTCAGTCCATCTTCCTGCACTGTAG 2262 0.4355 MALEADEMDSLFEGMILFNPSQTLADQDGVDGNCDPIPLTDASASLSSSSSQPLDENLFSDLTLITPNQFRNPLLDPSPTPISTSTTREETPSVSRQISRKKKRASLRIGYGRDSLNQLSLVDDAEVQSSPSDDSHSQTKSFSLLPDETLDSHPSPPTTSQAILVREDHDLVLDDVQFKPFPQQNEQEQIQLEEEKTTCSTSTEANFDRVRAIISEKLHHARQLAASISASRKDSMRRRRKAAQNLNLASTKSMELEKELEEACEAEDFEMAERLSQSLAGAEKDKQAFIAALRDAEAECDAIDSKMQEVLERQITAEEECVSLLEQFATDAANNANEISKRAQFLSSKEMDQWFSSTEALEVRKLELEIESHLISDTRLLLNDSIEHAAEDERREREFLCKRKDTLMDELEKLLALVREKEDEIAENDANIKAVDKRIADVVSGFQEMHLSINMKYDNLQSSLSQTELESEALSMKKKEIDDLLSEEEERGAKLRELARISADEAKAYEEVVGLRKSFALSIVKSREDKLRLAKTEEKLSEEVQILRQEVSAARASLQELSSTKSSIQQEIASSKQRIFFIDKIVPELEAEKKVAAAARNFKEAARVAAEAKKLSVEKEGEEVKMDGAMLELGKLEEEIKDTVNWLVEADELILFKEKEVAMARFQRLLLVAGAAKAERLAAVELGDLEEANLLLAEAEAAEVEAKNLEQSYNFKEEEFENLPKHFMSMELVSNLGGKQLAELAASVHLPAL* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0008 753 MobiDBLite consensus disorder prediction 27 53 - -
Vvi18g0008 753 Coils Coil 239 266 - -
Vvi18g0008 753 Coils Coil 390 438 - -
Vvi18g0008 753 Coils Coil 279 313 - -
Vvi18g0008 753 Coils Coil 530 578 - -
Vvi18g0008 753 Coils Coil 619 639 - -
Vvi18g0008 753 MobiDBLite consensus disorder prediction 125 160 - -
Vvi18g0008 753 MobiDBLite consensus disorder prediction 69 93 - -
Vvi18g0008 753 PANTHER NEUROFILAMENT LIGHT PROTEIN 2 751 - -
Vvi18g0008 753 MobiDBLite consensus disorder prediction 69 102 - -
Vvi18g0008 753 Coils Coil 689 719 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0008 - - vvi:100246165 1281.54