Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0007 ATGGAGAGCGACAAGAAATCCTCCGTTTCCGATGTGGGTGCCTGGGCCATGAATGTTATCAGCTCCGTCGGAATTATCATGGCTAACAAGCAGCTTATGTCCGCCAGTGGTTACGCATTCAGCTTCGCCACCACTTTAACTGGGTTTCATTTTGCGGTTACTGCACTGGTTGGTCTGGTGTCAAATGCTACTGGCTATTCTGCATCAAAGTATGTTCCTTTGTGGGAGCTTCTCTGGTTCTCAATTGTAGCCAATATGTCTATCACAGGGATGAACTTGAGCCTCATGCTAAACTCAGTTGGATTCTATCAAATTTCAAAACTGAGCATGATTCCAGTGGTATGTGTGATGGAATGGATCCTTCATAACAAACACTACTCTAGGGAAGTGAAGATTTCTGTGGTGGTTGTGGTTATAGGAGTGGGTGTCTGCACTGTAACTGATGTGAAAGTTAATGCTAAAGGTTTCATATGTGCCTGTGTAGCAGTAGTGTCAACATCTTTGCAGCAAATTTCAATAGGTTCTTTGCAAAAGAAGTACTCAATTGGATCTTTCGAATTGCTGAGTAAAACTGCTCCGATTCAGTCCATCTCCCTCCTTGTGCTTGGTCCATTCATCGATTACTTCCTTAATGGCAAATTTATTACAAACTATAAGCTGTCTTCTGGTGTCATTTTTTTCATACTCCTTTCATGCTCCCTAGCAGTGTTCTGCAATGTGAGCCAGTACCTCTGCATAGGACGCTTCTCAGCAGTTTCCTTCCAGGTTTTAGGTCACATGAAAACAGTTTGTGTTCTTACACTGGGGTGGCTGCTCTTTGATTCAGAGCTGACTTTTAAGAATATTTCAGGAATGATTGTTGCAGTTGTTGGAATGATAATTTATAGCTGGGCTGTGGAGATTGAAAAGCAGGCAAATGCGAAGACAATGTCCAATGTTAAAAACAGCCTGACAGAAGAGGAAATTAGACTTCTGAAGGATGGGATAGAGAAGACACCAGTAAAGGATATTGAACTTGGTGAATCTAAAGAATAG 1035 0.4203 MESDKKSSVSDVGAWAMNVISSVGIIMANKQLMSASGYAFSFATTLTGFHFAVTALVGLVSNATGYSASKYVPLWELLWFSIVANMSITGMNLSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSREVKISVVVVVIGVGVCTVTDVKVNAKGFICACVAVVSTSLQQISIGSLQKKYSIGSFELLSKTAPIQSISLLVLGPFIDYFLNGKFITNYKLSSGVIFFILLSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNISGMIVAVVGMIIYSWAVEIEKQANAKTMSNVKNSLTEEEIRLLKDGIEKTPVKDIELGESKE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0007 344 Pfam Triose-phosphate Transporter family 22 296 IPR004853 -
Vvi18g0007 344 PANTHER SOLUTE CARRIER FAMILY 35 13 299 - -
Vvi18g0007 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0007 Vvi-Chr18 99836 105167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0007 92 330 Organic Solute Cotransporters AT1G77610 25.306 1.11e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0007 - - vvi:100265002 659.448